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The map label for this gene is atpF

Identifier: 86606755

GI number: 86606755

Start: 2132613

End: 2133155

Strand: Reverse

Name: atpF

Synonym: CYA_2115

Alternate gene names: 86606755

Gene position: 2133155-2132613 (Counterclockwise)

Preceding gene: 86606756

Following gene: 86606754

Centisome position: 72.74

GC content: 63.35

Gene sequence:

>543_bases
GTGCCCGCTTGGCTTTTGGCCGTTGCCGAGCCGGTGACGGAAGCCACTGAGGGTTCTGCAGAAAAGGGGATCCTGGATGC
GATTCTGGAAAGCAACTTAATCAACATCGCCATCATCCTCAGCCTGCTGTACATTTTGGGCCGCCGGGTGGTGGGGGAAG
CTCTGGCCAAACGGCGAGAAGGCATCCTCGAGGAGCTGCGCCAGGCGGAGCAGCGCAAGCAGGAGGCGATCGAGAGGCTG
GCGGAGGAGCAGCAAAAGCTGGCGCAGGCTCAGCAGGAGGCGGAGCGCATTCGCAAACAGGCGGAGGCCAATGCGGAAGC
CCGCCGGCAGGAGCTGTTGCAGCAGGCGGAGCGGGAGATCGAGCGGCTGCGCGCCAACGCCGAAAGGGATCTCTCTGCCG
AACAAGAGCAAATTCTCCAGGAGCTGCGCCGCCAGATCGTGCGCCAAGCCCTGAGCAAGGTGGAGCAGGAGCTGCCGCAA
CACCTCAACGAGCAGGTGCACCAGCGCCTGATTGAACGGGGGATCCAGATGATTGCCCGCTAG

Upstream 100 bases:

>100_bases
CCATTGCCGCCCAGATCACCGAGAAGCTGTTGGGCAGCGCCCGTTAAGTGGCCAGTTGAACATTCCTTTGGAGTAGCGCG
TGATGCTGGTGTGGAGCCTT

Downstream 100 bases:

>100_bases
GAGGAAAGGGGAAGTTATGATCAGCAGCACCATGGCCGCCAGAGTGGTGGATCCCTACGCCGAAGCCCTTGTTTCGCTGG
CCTCTGCGCAGGGATTATTG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPAWLLAVAEPVTEATEGSAEKGILDAILESNLINIAIILSLLYILGRRVVGEALAKRREGILEELRQAEQRKQEAIERL
AEEQQKLAQAQQEAERIRKQAEANAEARRQELLQQAEREIERLRANAERDLSAEQEQILQELRRQIVRQALSKVEQELPQ
HLNEQVHQRLIERGIQMIAR

Sequences:

>Translated_180_residues
MPAWLLAVAEPVTEATEGSAEKGILDAILESNLINIAIILSLLYILGRRVVGEALAKRREGILEELRQAEQRKQEAIERL
AEEQQKLAQAQQEAERIRKQAEANAEARRQELLQQAEREIERLRANAERDLSAEQEQILQELRRQIVRQALSKVEQELPQ
HLNEQVHQRLIERGIQMIAR
>Mature_179_residues
PAWLLAVAEPVTEATEGSAEKGILDAILESNLINIAIILSLLYILGRRVVGEALAKRREGILEELRQAEQRKQEAIERLA
EEQQKLAQAQQEAERIRKQAEANAEARRQELLQQAEREIERLRANAERDLSAEQEQILQELRRQIVRQALSKVEQELPQH
LNEQVHQRLIERGIQMIAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_SYNJA (Q2JSV9)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_475518.1
- STRING:   Q2JSV9
- GeneID:   3899162
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_2115
- TIGR:   CYA_2115
- eggNOG:   NOG87654
- HOGENOM:   HBG708990
- OMA:   WGNFAFR
- ProtClustDB:   PRK07352
- BioCyc:   SSP321327:CYA_2115-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20715; Mature: 20584

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x15316760)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLLAVAEPVTEATEGSAEKGILDAILESNLINIAIILSLLYILGRRVVGEALAKRRE
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILEELRQAEQRKQEAIERLAEEQQKLAQAQQEAERIRKQAEANAEARRQELLQQAEREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ERLRANAERDLSAEQEQILQELRRQIVRQALSKVEQELPQHLNEQVHQRLIERGIQMIAR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
PAWLLAVAEPVTEATEGSAEKGILDAILESNLINIAIILSLLYILGRRVVGEALAKRRE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILEELRQAEQRKQEAIERLAEEQQKLAQAQQEAERIRKQAEANAEARRQELLQQAEREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ERLRANAERDLSAEQEQILQELRRQIVRQALSKVEQELPQHLNEQVHQRLIERGIQMIAR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA