Click here to switch to the map view.

The map label for this gene is atpG

Identifier: 86606756

GI number: 86606756

Start: 2133209

End: 2133682

Strand: Reverse

Name: atpG

Synonym: CYA_2116

Alternate gene names: 86606756

Gene position: 2133682-2133209 (Counterclockwise)

Preceding gene: 86606757

Following gene: 86606755

Centisome position: 72.75

GC content: 63.08

Gene sequence:

>474_bases
ATGATCTGTTCAACCCTGTTGGCCGTTGAAGCTGCCGAGAAAAATGGCCTCTTCGATCTCGACGCCACCTTGCCCATCAT
TGCCGTCCAATTTCTGTTGCTGGTGGCCGTGCTCAACTCCCTCTTCTACGAGCCGGTTACTCGGGTTATCGACAGCCGCA
ACGACTACATCCGCACCACCCAGGCGGAGGCCCAGGAGCGGCTGGACAAGGCGATGGCCCTGACCCGCCAGTACGAGGCT
GAGATCGGCCAGGCCCGCCTCCAGGCGCAGCAGGTGATCGCCGAGGCGGAAGCGGCTGCGGCCCGTATCCGTTCGGAGAA
GCTGGCGGCGGCCCAGGCGGAGATCCAAGCTAAGCTGGAGGCGGCGCGGCGGCAAATCGAGCAGGAAAAGCAGACGGCGC
TCGAACAACTGCAGCAGCAAGTGGATGCCATTGCCGCCCAGATCACCGAGAAGCTGTTGGGCAGCGCCCGTTAA

Upstream 100 bases:

>100_bases
GCCTGATGTCTCTGGGGGCGGCCCGGATCAATAGCTCTGTTGCGCCGGTTCGCCCCCTGCCTTGTTCGATGTTGGATCCC
GTTTCTGTTGGTGCGGCCCC

Downstream 100 bases:

>100_bases
GTGGCCAGTTGAACATTCCTTTGGAGTAGCGCGTGATGCTGGTGTGGAGCCTTGTGCCCGCTTGGCTTTTGGCCGTTGCC
GAGCCGGTGACGGAAGCCAC

Product: F0F1 ATP synthase subunit B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b'; ATPase subunit II; F-type ATPase subunit b'; F-ATPase subunit b'

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MICSTLLAVEAAEKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYIRTTQAEAQERLDKAMALTRQYEA
EIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLEAARRQIEQEKQTALEQLQQQVDAIAAQITEKLLGSAR

Sequences:

>Translated_157_residues
MICSTLLAVEAAEKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYIRTTQAEAQERLDKAMALTRQYEA
EIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLEAARRQIEQEKQTALEQLQQQVDAIAAQITEKLLGSAR
>Mature_157_residues
MICSTLLAVEAAEKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYIRTTQAEAQERLDKAMALTRQYEA
EIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLEAARRQIEQEKQTALEQLQQQVDAIAAQITEKLLGSAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPX_SYNJA (Q2JSV8)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_475519.1
- STRING:   Q2JSV8
- GeneID:   3899163
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_2116
- TIGR:   CYA_2116
- eggNOG:   COG0711
- HOGENOM:   HBG708402
- OMA:   DFDATLP
- ProtClustDB:   PRK07353
- BioCyc:   SSP321327:CYA_2116-MONOMER
- HAMAP:   MF_01399
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17321; Mature: 17321

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16040248)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICSTLLAVEAAEKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYIRTT
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QAEAQERLDKAMALTRQYEAEIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARRQIEQEKQTALEQLQQQVDAIAAQITEKLLGSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MICSTLLAVEAAEKNGLFDLDATLPIIAVQFLLLVAVLNSLFYEPVTRVIDSRNDYIRTT
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QAEAQERLDKAMALTRQYEAEIGQARLQAQQVIAEAEAAAARIRSEKLAAAQAEIQAKLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARRQIEQEKQTALEQLQQQVDAIAAQITEKLLGSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA