Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606596

Identifier: 86606596

GI number: 86606596

Start: 1962899

End: 1963336

Strand: Reverse

Name: 86606596

Synonym: CYA_1950

Alternate gene names: NA

Gene position: 1963336-1962899 (Counterclockwise)

Preceding gene: 86606597

Following gene: 86606595

Centisome position: 66.94

GC content: 62.56

Gene sequence:

>438_bases
ATGCCCGTCTATACTCAAGCGATTGAAATTGCCGCTGGCGTGGCCCAGGTGGAGCGCTGTCTAATCGATCCAGCGCTGAT
GCGGCGCTGGCTCAACCCCCTGTTGAGCTGTGAGGCGCTGGGATCCCCCACTGGGCAACTGGGCAGCCGCTACCGCTTTT
TCCTGCGCCTGCCGCTGGTTTCCCCCAGCCTAGACTGCGTGATCGCCGAGCGGGCCGAGGGCCTGGTGCAGTGGCAGTTT
GAGGGTTTTTTTCAGGGCACCGACCGCTGGGAATGTTGCCCCCAGCCGCTGGGAACGCTATTGGTAAACCGCTTTGAGTT
TTGCATCCCCAACCCTTGGGTGGCGGCAGGGTTCTATCTGGTGGCAGCGGAGCTGACCCGGCACGACATGCGGGCACAAC
TGCGACGGCTAAAGGCAGTGGCCGAGGCTTTGGGTTAG

Upstream 100 bases:

>100_bases
CGGGCCGGATCAGGTGGAGTATCGCGATATCCTGATTTTGCTGAGTACCGTCGTCCCTGGCGGCGAAGCGCAGCCTGCCG
CTGCAGCCGCTCCCTAGAGC

Downstream 100 bases:

>100_bases
GCTGGTGGCAGGTAGTAAAGAAACGTAAAAAATGGCAATGACCAGCAACAGCAGCCTGTTCAACCGTCGCTTTTTCGACA
ACTTCATCCCCCAGCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQF
EGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG

Sequences:

>Translated_145_residues
MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQF
EGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG
>Mature_144_residues
PVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQFE
GFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16297; Mature: 16166

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLV
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCC
SPSLDCVIAERAEGLVQWQFEGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYL
CCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
VAAELTRHDMRAQLRRLKAVAEALG
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLV
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCC
SPSLDCVIAERAEGLVQWQFEGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYL
CCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
VAAELTRHDMRAQLRRLKAVAEALG
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA