| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is cbiG/cobJ-2
Identifier: 86606498
GI number: 86606498
Start: 1847074
End: 1848795
Strand: Reverse
Name: cbiG/cobJ-2
Synonym: CYA_1847
Alternate gene names: 86606498
Gene position: 1848795-1847074 (Counterclockwise)
Preceding gene: 86606502
Following gene: 86606495
Centisome position: 63.04
GC content: 64.58
Gene sequence:
>1722_bases GTGCAGGGCTGTCTCTTCATCTTGGCCGCAGGGTCGGTGGTGCGGCTCATTGCCCCCCTCTTGCAGGACAAGCAGCGGGA TCCAGCGGTGGTGGTGGTGGACGAAGCCGGTCGCTGGGCTATTAGCCTGTGCGGGGGACATGTGGGGGGGGCCGATGCCC TGGCGCGGCAGGTGGCCGCTACCTTGGGAGCCCAGCCGGTTCTCACCTCTGCTTCCGAGGGGCTGGGGATCCCGCCTTTG GATTTGCTGGGGGATCCCTACGGCTGGCGGCGGGGCGCTGGAGATTGGAACGGGGTGGCAGCCGCCTTGACGCGGGGAGA GCCGGTGGCCGTTCACCAGACCTGCGGCACGCGGCTTTGGCGACAAGCTTGGCCGGCAGATCATCCCCTAGTGGCCTCCT CTCCTCCCCATCCCGTTGCCCAGATCTGGATTGGGGAATACCTCTCCCCTCCCACGGGGATCCCGACAGTGCACTGGCAT CCGCGGGTGCTCTGGGTGGGGGTGGGCTGCGAGCGGGGCACTACCCGCGTTTGGCTAGAGGGATCCCTGCGCCGCCTGTT GCAGGCCCAGGGGCTGGCTTTTGAGGCCATTGCCGGCTTGGCCACCTTGGAGCTGAAGCAAAACGAGCCGGGTCTTCTGG AGCTGGCCCAAGCCTATGGCTGGCCCATTGAGTTTTTCTCGGCAGAGGCTTTGGCTGGGATCCCAGTGCCCCACCCTTCG GAGGCGGTGCGGCAGGCGGTGGGCACTCCCTCCGTAGCCGAGGCGGCTGCCCTCTTGGCAGCTCAGACTTGTCAGACTTG GGGAAGAGGTGACAAGGTTCCTGAGAGGCCATCCTGTGTTGCGGAGAAGGTAGAGCCCTTTGGGGGAGCAACCCTCCTCT GCCCCAAGCAGGTCTTCACCTCGAAAACCGAAGGGGCCTGTACCCTGGCCATTGCCCGCGCGGCGCAGGAGTATTCCCCT CGCAGCGGCCACCTCTGGCTCATCGGCACTGGTCCTGGGGATCTGGGTCAATTGACTTTGGCTGCCCGTATGGCTTTAAC TCAGGCCGATGTGGTTGTTGGCTACCAGCTTTATCTGGATCTGGTGGATCCCCTTTTGCACCCCGGCCAAATTCGGGAGG CCTCTCCCATTACCCAAGAGCTGCAGCGGGCCAAACAGGCCATCGCTTGGGCGCAGCAGGGGCTGAAGGTGGCGGTGATT TCTTCGGGGGATGCCGGCATTTACGGCATGGCGGGCTTGGTGCTGGAGTGCTTGGTCCGCTCTGGCTGGGATGGGATCCG CCCTTCTCTGGAGGTGCTGCCGGGGATCTCTGCCTTCCAGGCGGCTGCTGCCCGGCTGGGGGCTCCGCTGATGCACGACT TCTGCGCCATTTCCCTCTCGGATTTGCTTACCCCCTGGCCAGTGATTGCAAAACGCCTGCAGGCGGCTGCAGCTGCCGAT TTTGTGGTGGCCCTTTACAACCCCCGCTCCCGGCAGCGGGTGGATCCCTTCCTCAAGGCTCTGCAGATCTTTTTGCAGGC CCGGCCCGCCCATACCCCTGTGGCTTTGGCCCGCAACCTCTACCGCCCTGGCGAAACTCTCCGCCTTACCACCCTGGGGG AGCTGGATCCAGAGCAGGTGGACATGCTCACCCTGGTTCTTATCGGCAACTCTCAGACCTTTCGCCATGGGGACCGGCTG ATTACCCCGCGGGGCTATTGCCTGGGCGAAGAACCCACTTGA
Upstream 100 bases:
>100_bases CCCGCAGGGGCTGCCCTCCCCCTGGCAGGCTTACGGGGATCCCAAGGATCCCACAGCGCCCAGATCTCTGGCAGAAGCCG TTGCCCAAACCTGGCCCCAG
Downstream 100 bases:
>100_bases CGGGTGTTAAGCCCAGACTCAAAACACCCTCAGATGCCGGGGATCCAACTGTAGCCACCAGGGGGATCCCCAAGTCTCCA CCTCGCGCCAGCGCTCCCGC
Product: cbiG protein/precorrin-3B C17-methyltransferase
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHVGGADALARQVAATLGAQPVLTSASEGLGIPPL DLLGDPYGWRRGAGDWNGVAAALTRGEPVAVHQTCGTRLWRQAWPADHPLVASSPPHPVAQIWIGEYLSPPTGIPTVHWH PRVLWVGVGCERGTTRVWLEGSLRRLLQAQGLAFEAIAGLATLELKQNEPGLLELAQAYGWPIEFFSAEALAGIPVPHPS EAVRQAVGTPSVAEAAALLAAQTCQTWGRGDKVPERPSCVAEKVEPFGGATLLCPKQVFTSKTEGACTLAIARAAQEYSP RSGHLWLIGTGPGDLGQLTLAARMALTQADVVVGYQLYLDLVDPLLHPGQIREASPITQELQRAKQAIAWAQQGLKVAVI SSGDAGIYGMAGLVLECLVRSGWDGIRPSLEVLPGISAFQAAAARLGAPLMHDFCAISLSDLLTPWPVIAKRLQAAAAAD FVVALYNPRSRQRVDPFLKALQIFLQARPAHTPVALARNLYRPGETLRLTTLGELDPEQVDMLTLVLIGNSQTFRHGDRL ITPRGYCLGEEPT
Sequences:
>Translated_573_residues MQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHVGGADALARQVAATLGAQPVLTSASEGLGIPPL DLLGDPYGWRRGAGDWNGVAAALTRGEPVAVHQTCGTRLWRQAWPADHPLVASSPPHPVAQIWIGEYLSPPTGIPTVHWH PRVLWVGVGCERGTTRVWLEGSLRRLLQAQGLAFEAIAGLATLELKQNEPGLLELAQAYGWPIEFFSAEALAGIPVPHPS EAVRQAVGTPSVAEAAALLAAQTCQTWGRGDKVPERPSCVAEKVEPFGGATLLCPKQVFTSKTEGACTLAIARAAQEYSP RSGHLWLIGTGPGDLGQLTLAARMALTQADVVVGYQLYLDLVDPLLHPGQIREASPITQELQRAKQAIAWAQQGLKVAVI SSGDAGIYGMAGLVLECLVRSGWDGIRPSLEVLPGISAFQAAAARLGAPLMHDFCAISLSDLLTPWPVIAKRLQAAAAAD FVVALYNPRSRQRVDPFLKALQIFLQARPAHTPVALARNLYRPGETLRLTTLGELDPEQVDMLTLVLIGNSQTFRHGDRL ITPRGYCLGEEPT >Mature_573_residues MQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHVGGADALARQVAATLGAQPVLTSASEGLGIPPL DLLGDPYGWRRGAGDWNGVAAALTRGEPVAVHQTCGTRLWRQAWPADHPLVASSPPHPVAQIWIGEYLSPPTGIPTVHWH PRVLWVGVGCERGTTRVWLEGSLRRLLQAQGLAFEAIAGLATLELKQNEPGLLELAQAYGWPIEFFSAEALAGIPVPHPS EAVRQAVGTPSVAEAAALLAAQTCQTWGRGDKVPERPSCVAEKVEPFGGATLLCPKQVFTSKTEGACTLAIARAAQEYSP RSGHLWLIGTGPGDLGQLTLAARMALTQADVVVGYQLYLDLVDPLLHPGQIREASPITQELQRAKQAIAWAQQGLKVAVI SSGDAGIYGMAGLVLECLVRSGWDGIRPSLEVLPGISAFQAAAARLGAPLMHDFCAISLSDLLTPWPVIAKRLQAAAAAD FVVALYNPRSRQRVDPFLKALQIFLQARPAHTPVALARNLYRPGETLRLTTLGELDPEQVDMLTLVLIGNSQTFRHGDRL ITPRGYCLGEEPT
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.131
Molecular weight: Translated: 61071; Mature: 61071
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHVGGADALARQVAA CCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH TLGAQPVLTSASEGLGIPPLDLLGDPYGWRRGAGDWNGVAAALTRGEPVAVHQTCGTRLW HHCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHH RQAWPADHPLVASSPPHPVAQIWIGEYLSPPTGIPTVHWHPRVLWVGVGCERGTTRVWLE HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCCEEEEEC GSLRRLLQAQGLAFEAIAGLATLELKQNEPGLLELAQAYGWPIEFFSAEALAGIPVPHPS HHHHHHHHHCCCHHHHHHCEEEEEECCCCCCHHHHHHHCCCCCEECCCHHHCCCCCCCCH EAVRQAVGTPSVAEAAALLAAQTCQTWGRGDKVPERPSCVAEKVEPFGGATLLCPKQVFT HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEECHHHHC SKTEGACTLAIARAAQEYSPRSGHLWLIGTGPGDLGQLTLAARMALTQADVVVGYQLYLD CCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVDPLLHPGQIREASPITQELQRAKQAIAWAQQGLKVAVISSGDAGIYGMAGLVLECLVR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH SGWDGIRPSLEVLPGISAFQAAAARLGAPLMHDFCAISLSDLLTPWPVIAKRLQAAAAAD CCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC FVVALYNPRSRQRVDPFLKALQIFLQARPAHTPVALARNLYRPGETLRLTTLGELDPEQV EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH DMLTLVLIGNSQTFRHGDRLITPRGYCLGEEPT CEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MQGCLFILAAGSVVRLIAPLLQDKQRDPAVVVVDEAGRWAISLCGGHVGGADALARQVAA CCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH TLGAQPVLTSASEGLGIPPLDLLGDPYGWRRGAGDWNGVAAALTRGEPVAVHQTCGTRLW HHCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHH RQAWPADHPLVASSPPHPVAQIWIGEYLSPPTGIPTVHWHPRVLWVGVGCERGTTRVWLE HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCCCCCEEEEEC GSLRRLLQAQGLAFEAIAGLATLELKQNEPGLLELAQAYGWPIEFFSAEALAGIPVPHPS HHHHHHHHHCCCHHHHHHCEEEEEECCCCCCHHHHHHHCCCCCEECCCHHHCCCCCCCCH EAVRQAVGTPSVAEAAALLAAQTCQTWGRGDKVPERPSCVAEKVEPFGGATLLCPKQVFT HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEECHHHHC SKTEGACTLAIARAAQEYSPRSGHLWLIGTGPGDLGQLTLAARMALTQADVVVGYQLYLD CCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVDPLLHPGQIREASPITQELQRAKQAIAWAQQGLKVAVISSGDAGIYGMAGLVLECLVR HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH SGWDGIRPSLEVLPGISAFQAAAARLGAPLMHDFCAISLSDLLTPWPVIAKRLQAAAAAD CCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC FVVALYNPRSRQRVDPFLKALQIFLQARPAHTPVALARNLYRPGETLRLTTLGELDPEQV EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHH DMLTLVLIGNSQTFRHGDRLITPRGYCLGEEPT CEEEEEEECCCCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]