Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is cysR [H]

Identifier: 86606206

GI number: 86606206

Start: 1550208

End: 1550846

Strand: Reverse

Name: cysR [H]

Synonym: CYA_1541

Alternate gene names: 86606206

Gene position: 1550846-1550208 (Counterclockwise)

Preceding gene: 86606209

Following gene: 86606202

Centisome position: 52.88

GC content: 63.07

Gene sequence:

>639_bases
ATGCCTGAAACGATGCCCGGCCATTTTGCTGCCGGCCTGCCTACACGGGAGCGGCAATTGCTAGAAGACCTCTACCGAGG
CCGCAGTTTATCTCCCTACAGTCCCGGCCAGGTCATCCCTTTGTTTCCCGAGGAGTGGGTGATCGTCTGTCGGGGTGTGG
TGCAATTGACTACCCTCTATCCCAATGGCGGCGAGGCGCTGTTGGGATTTGCTGGCCCCTCCATGCCCCTGGGATCCCCG
CTGACAATGTTGGATCCCTACCAAGCCAAGGCGTTGACGGCGGTTGACGTGTTGCGGCTGCCGGCAGCCGAGGTGGAAGC
CTCAGCAACCCTGAGCCAGGGGCTGCTCAAGCAGTTGGTGCGGCGGTTGCGCCAAACCGAAGCGCTGCTGGCCTTGGCCG
GGCGGCGGCGGGTGGAGGATCGGCTGCGCCAGTTGCTCTCCCTATTGGCGGTGGAGTTGGGATCCCCAATGGCGACGGGG
GTGCGCCTGCAGGTGCGCCTCACCCACCAAGACTTGGCCAATGCCATCGGCACTACCCGCGTCACCATCACCCGTCTTTT
GAACCGTTTCCGCCAGCAGGGCTGGATCGCGGTGGACAAAAACCGCCATCTCATCATCAAGCTGGCCCAAACGCCCTGA

Upstream 100 bases:

>100_bases
TCCTCTACCCCAACTCAGCCGCGAAGCCAACCCCATGCTGTTATTGGTAGGGGAAAGCCCAACGACCAGTGTGCCCAGTT
TGCCCTAGCGGAGCTAGCCT

Downstream 100 bases:

>100_bases
CGGCTTTAAGCCTGGCGTTGGAGCTGTTGGAGGAGCCAGTTGGCGGCGGCGGTGTTGGTCTCGCTGGCCAGGCGTTCCAG
CGCCTGCTCAAGCAGAGCTA

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSP
LTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATG
VRLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP

Sequences:

>Translated_212_residues
MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSP
LTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATG
VRLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP
>Mature_211_residues
PETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSPL
TMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGV
RLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP

Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 23386; Mature: 23255

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLY
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHEEEC
PNGGEALLGFAGPSMPLGSPLTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLV
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGVRLQVRLTHQDLANAIGTTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHH
VTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP
HHHHHHHHHHHHCCCEEEECCCEEEEEECCCC
>Mature Secondary Structure 
PETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLY
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHEEEC
PNGGEALLGFAGPSMPLGSPLTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLV
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGVRLQVRLTHQDLANAIGTTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHH
VTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP
HHHHHHHHHHHHCCCEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]