Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606155

Identifier: 86606155

GI number: 86606155

Start: 1495536

End: 1496153

Strand: Reverse

Name: 86606155

Synonym: CYA_1488

Alternate gene names: NA

Gene position: 1496153-1495536 (Counterclockwise)

Preceding gene: 86606156

Following gene: 86606154

Centisome position: 51.02

GC content: 62.46

Gene sequence:

>618_bases
GTGGAAAAAGCAGTTCGCGGAGCTTGCGGTTTGGCAGTTTGCCTTTGGCTAGTTAGTCTGGGATCCTTGTCGGCCCAGGC
TGACCCCAGTGGCAGCCATTTCGCAGCGCCGCAGGACTCACGTCCTTATCCCCATGCCCTGGAGCCCACCAACCTGCCCT
CACCCAGATCCCGTCTCACCCAACCGCTGGCCGGCTCTCAGGCTTCCACCCCCGCCCAAAACCAACCGGCCTCTCCCGAG
ATAGAGCTATCGCCTTTTCCCGATTTCCCCCTCCTTAAGGAGTTGGATCCGCCCCTCCCCACCTTGGCCGACCTGGGCAT
CCATTGGGATCGCCTGGCTCTGCTGCCCGACCTCGAGCTGGCCGAGGAAATGGATAGGGAGTTCAGCCGCCGCTTGGCCC
GCCTGAACCGGCAGATTGCCAACCAACAAGAGCGCCTCTACCGCCTGTTGCAAACCTGGGACTCTGACGAGGCCGATATC
CGTCAAATTCAGGCCCAACTGAGCCAGTTGCGCACAGAACGGGATCGCCTGGCGCTGGAACACCTGTTGCTGCTGCGGCA
GTTGCAAGAGAACTTCGCCCTGCCTCTACCGGCCCGCTCTGCCGCCAGCTCTCCCTGA

Upstream 100 bases:

>100_bases
AGATGCCTACTCAATTTTGTTTGAGACAACGCCGAACCTCGGCGACGAGGTGAGCTGGGAATGATTCTGAGCAGGCTTGA
GAAAGATTGAGGAGTGGAGG

Downstream 100 bases:

>100_bases
GGTGGGCCCAAGTTATGATCGGCAGAGGGCAACCACTGACGGAGCTGAGCGATGGCCCAAGTGCCCAGCAACCCAGAGAT
CGAGCAGTTGGCCGCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE
IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI
RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP

Sequences:

>Translated_205_residues
MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE
IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI
RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP
>Mature_205_residues
MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE
IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI
RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22845; Mature: 22845

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QPLAGSQASTPAQNQPASPEIELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLEL
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHCCCHHH
AEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDRLALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLLLLRQLQENFALPLPARSAASSP
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
QPLAGSQASTPAQNQPASPEIELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLEL
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHCCCHHH
AEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDRLALE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLLLLRQLQENFALPLPARSAASSP
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA