Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606129

Identifier: 86606129

GI number: 86606129

Start: 1466743

End: 1467078

Strand: Reverse

Name: 86606129

Synonym: CYA_1461

Alternate gene names: NA

Gene position: 1467078-1466743 (Counterclockwise)

Preceding gene: 86606130

Following gene: 86606128

Centisome position: 50.02

GC content: 57.74

Gene sequence:

>336_bases
ATGGAGCGGGCTGTTCTGGAGATGGTGAACGAGCTGCTGCTCCTGGAAAGCCAGCAGCGCTACTGCTCCTGTGAGAGATT
CTGTCACGATGCCGCCGCCTTGGCCCTCAACAACCTCCAGCCCCGCTACACCACCAGTTTTGAAGGCTCCATATACACCC
TGGAAGCCATCCAAGCAGATCAAGAGTTGCAGAGCCTGATTCGGCGGGAGGTGGGGAAGGCTATGGAGATAGTGGCGGCA
AATCCCCGTTGCCCAGAGCCTGATTGCCCGCTGCAGCGCAACGTCGAGGCAGTAGAGTTAGAGCTGGCTCCTAGCGACAC
TCGCAAACAAAACTAA

Upstream 100 bases:

>100_bases
ACCGTCCTGTTTTTGGGAAAATGAGGACTGGCGGCGGGATCAGTGACATCGGGAGGCAGCCATGGAGGCACGCAAACCTC
TGAAGAGGTTGGAAAATCAG

Downstream 100 bases:

>100_bases
AGAATGGCTTTAATCGTCTCCTCTGCGCCGGTAGCCTTCCTCGGCCCTGTTGGAACCTACACGGAGTTGGCCGCTCTGCT
CGCCTGTCCCGAGCAGCCCC

Product: competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA
NPRCPEPDCPLQRNVEAVELELAPSDTRKQN

Sequences:

>Translated_111_residues
MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA
NPRCPEPDCPLQRNVEAVELELAPSDTRKQN
>Mature_111_residues
MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA
NPRCPEPDCPLQRNVEAVELELAPSDTRKQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12596; Mature: 12596

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQAD
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHCC
QELQSLIRREVGKAMEIVAANPRCPEPDCPLQRNVEAVELELAPSDTRKQN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQAD
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHCC
QELQSLIRREVGKAMEIVAANPRCPEPDCPLQRNVEAVELELAPSDTRKQN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA