Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605988

Identifier: 86605988

GI number: 86605988

Start: 1317026

End: 1317757

Strand: Reverse

Name: 86605988

Synonym: CYA_1307

Alternate gene names: NA

Gene position: 1317757-1317026 (Counterclockwise)

Preceding gene: 86605989

Following gene: 86605987

Centisome position: 44.93

GC content: 62.7

Gene sequence:

>732_bases
ATGTTTTTGCCCTGGCCCGCTTTTGCCCAGATCGCCAGCTCCTTGCTCAATCCTCTAGTGGCCGCCTGGATTCGCTCTGA
GGTGCAGCAGGTGGACAACTTGCGGGTGCAGATCGCCGGTTCCGACGCCCAGATTTTGAACGGCCAGATCCCCCAGGCCC
AGGTGTCGGGAGACAACCTCATCTATCAGGGATTCCAGGTCAGCCACCTGCGGCTGCAGGGCCAGGATATTCGCCTCAAT
GTAGGGGAAGCCATCCAGGGACGTAGTCCCCTGCGGCTGTTGGCCCCCGTGCCGGTGCAGGTGAGCTTGCGCCTCACCGA
AGACGATCTCAACCGCAGCCTTCAGGCTCCCCTCATCCAGTCCCAACTGGCCCAGGCGCAGGTGCAACTGCCCTTTGGAG
GTCAAGCGGTGCCCTTCTTGATCCGCCAGCCCCAGGTCACCTTGCAGCAAAATCGGCTGCGCATCCAGGCCCAATTGGTT
ACTCCCGAGGGGGTGGAGGTGCCGGTTACGGTGCTAACTGGGCTACAGGCTCAGGGTCCCAACCAGTTGCGGCTGGTCAA
TCCCCTGTGGGTGAGCGAAGGGCAGGAGATCCCCATCCCCGGCCTGGCGGATTTTCCCATCCAGTTGGATCCAGGCGTGC
GCATCGATCGCCTGGAGTTGCAGCCTGGCCAAATCCTCTACGAGGGCATGTTGGTCATCTACCCGGAGGCGGCGGCAGTG
CCGCAGGGGTAG

Upstream 100 bases:

>100_bases
TCCCTCTGTTTCCCAGATCCCACCGACAGCCTGCCGCCGCCGACGGCTCTCCCCAGGGGGGCAGCGGCTGGGGCTTGCTC
TGCTGCTGAGCCTGCCCACC

Downstream 100 bases:

>100_bases
CGGGTTGTCGCCAGGGCTCGACCACTTGAGCTTGCCTTTGGGCGGTGCCAGCGGGATCTGCGGTGGCCAAGTTGTGATCG
GGATCAAACCCAAGGTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MFLPWPAFAQIASSLLNPLVAAWIRSEVQQVDNLRVQIAGSDAQILNGQIPQAQVSGDNLIYQGFQVSHLRLQGQDIRLN
VGEAIQGRSPLRLLAPVPVQVSLRLTEDDLNRSLQAPLIQSQLAQAQVQLPFGGQAVPFLIRQPQVTLQQNRLRIQAQLV
TPEGVEVPVTVLTGLQAQGPNQLRLVNPLWVSEGQEIPIPGLADFPIQLDPGVRIDRLELQPGQILYEGMLVIYPEAAAV
PQG

Sequences:

>Translated_243_residues
MFLPWPAFAQIASSLLNPLVAAWIRSEVQQVDNLRVQIAGSDAQILNGQIPQAQVSGDNLIYQGFQVSHLRLQGQDIRLN
VGEAIQGRSPLRLLAPVPVQVSLRLTEDDLNRSLQAPLIQSQLAQAQVQLPFGGQAVPFLIRQPQVTLQQNRLRIQAQLV
TPEGVEVPVTVLTGLQAQGPNQLRLVNPLWVSEGQEIPIPGLADFPIQLDPGVRIDRLELQPGQILYEGMLVIYPEAAAV
PQG
>Mature_243_residues
MFLPWPAFAQIASSLLNPLVAAWIRSEVQQVDNLRVQIAGSDAQILNGQIPQAQVSGDNLIYQGFQVSHLRLQGQDIRLN
VGEAIQGRSPLRLLAPVPVQVSLRLTEDDLNRSLQAPLIQSQLAQAQVQLPFGGQAVPFLIRQPQVTLQQNRLRIQAQLV
TPEGVEVPVTVLTGLQAQGPNQLRLVNPLWVSEGQEIPIPGLADFPIQLDPGVRIDRLELQPGQILYEGMLVIYPEAAAV
PQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26587; Mature: 26587

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLPWPAFAQIASSLLNPLVAAWIRSEVQQVDNLRVQIAGSDAQILNGQIPQAQVSGDNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCEEECCCEE
IYQGFQVSHLRLQGQDIRLNVGEAIQGRSPLRLLAPVPVQVSLRLTEDDLNRSLQAPLIQ
EEECEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEHHHHCCCCCCHHHH
SQLAQAQVQLPFGGQAVPFLIRQPQVTLQQNRLRIQAQLVTPEGVEVPVTVLTGLQAQGP
HHHHHEEEECCCCCCCCEEEEECCCEEEECCEEEEEEEEECCCCCEEEEEEEECCCCCCC
NQLRLVNPLWVSEGQEIPIPGLADFPIQLDPGVRIDRLELQPGQILYEGMLVIYPEAAAV
CCEEEECEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCEEEEEECHHCC
PQG
CCC
>Mature Secondary Structure
MFLPWPAFAQIASSLLNPLVAAWIRSEVQQVDNLRVQIAGSDAQILNGQIPQAQVSGDNL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCCEEECCCEE
IYQGFQVSHLRLQGQDIRLNVGEAIQGRSPLRLLAPVPVQVSLRLTEDDLNRSLQAPLIQ
EEECEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEHHHHCCCCCCHHHH
SQLAQAQVQLPFGGQAVPFLIRQPQVTLQQNRLRIQAQLVTPEGVEVPVTVLTGLQAQGP
HHHHHEEEECCCCCCCCEEEEECCCEEEECCEEEEEEEEECCCCCEEEEEEEECCCCCCC
NQLRLVNPLWVSEGQEIPIPGLADFPIQLDPGVRIDRLELQPGQILYEGMLVIYPEAAAV
CCEEEECEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCEEEECCEEEEEECHHCC
PQG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA