| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605888
Identifier: 86605888
GI number: 86605888
Start: 1213464
End: 1214252
Strand: Reverse
Name: 86605888
Synonym: CYA_1202
Alternate gene names: NA
Gene position: 1214252-1213464 (Counterclockwise)
Preceding gene: 86605889
Following gene: 86605885
Centisome position: 41.4
GC content: 64.39
Gene sequence:
>789_bases ATGGAAACATTGAAGGGCAAGCCCATTGCCTCTAGTCCAAGCCGCCAGAAGCGGCCCTTGCTGCTCTATTTGCCGGGTAT GGATGGCACCGGCAAATTGTTTTACCGGCAGGCACAGGCTCTGCAAGCCGAGTTTCACGTCCGCCCTTTGAGCTTAAACC ACCCCGCAGCAGGGCAGAGCTGGGAGAGCCTGGCCGATTGGGTGGGATCCCAGCTGGACGAGGGAGCCTACCTGTGTGGC GAGTCCTTCGGAGCTTGCCTAGCCCTGGCTGTGGCTGCCCAGCAGCCGGAGCGCTGTCGTGGCCTGATTCTGGTTAATCC GGCCTCGTCGCTGCGGCGCCGGCCCTGGTGGTGGGCAGGTCATGTTCTCCTGCCTTTTTTGCCGCCGGCGCTCTACCACC AGATGGCGGAGCGGGGGCTGGGATTTTTGGCGGAGCTAAGCCAAATGGAGCCGCCGGATCGGGAGCGGCTGCGCCAGGCC GTTCACAGTGTTGAGCCCACGGTGGCCGCCCAGCGCCTGGCCTTGCTGGGATCGTTTGTCGTGGAGGAGCTGCCCCTGGA GTCGATGACCCTGCCGACGTTGCTGGTGGCGGGGGGGCGGGATCGCCTCCTGCCCTCGGTGCAGGAGGTGCAGCGTCTGG CGGAGCGACTGCCCCAGGCCCAGGTGGAGATCTCGCCTTTAAGCGGCCATGCTTGCCTTCTGGAGCGGCAGATGAACCTG CGGCGCTACTTGCTCAAGCCCGATGGGGTTTTTGCCCCGCTACTGCTTAATTCCGCTCCAGCGCATTGA
Upstream 100 bases:
>100_bases GGGGAGCAGGGCGCTCTACCTGCCGCCAGGAGCGGCTGCAGCTAATTCAGGAGTTGACGGCAGCCGCTCGCGAACAGGTG CGCTTGGGGTTGGCAAGGAG
Downstream 100 bases:
>100_bases GCAGGGAGAGGGATCCCCCCAAGTTTTCGATTCGCTCTTGGCAGGAGGGATCTTGTCCTTCTCGATCCAGCCAAAGGGCC CTCAAGCCTGCTGCCTTGGC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL RRYLLKPDGVFAPLLLNSAPAH
Sequences:
>Translated_262_residues METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL RRYLLKPDGVFAPLLLNSAPAH >Mature_262_residues METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQSWESLADWVGSQLDEGAYLCG ESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAGHVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQA VHSVEPTVAAQRLALLGSFVVEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL RRYLLKPDGVFAPLLLNSAPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28952; Mature: 28952
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQS CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC WESLADWVGSQLDEGAYLCGESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHCCCCEEEC HVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFV CCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH VEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL HHHCCCCHHCHHHHEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH RRYLLKPDGVFAPLLLNSAPAH HHHHCCCCCCCHHHHHCCCCCC >Mature Secondary Structure METLKGKPIASSPSRQKRPLLLYLPGMDGTGKLFYRQAQALQAEFHVRPLSLNHPAAGQS CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCC WESLADWVGSQLDEGAYLCGESFGACLALAVAAQQPERCRGLILVNPASSLRRRPWWWAG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCHHHHHCCCCEEEC HVLLPFLPPALYHQMAERGLGFLAELSQMEPPDRERLRQAVHSVEPTVAAQRLALLGSFV CCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH VEELPLESMTLPTLLVAGGRDRLLPSVQEVQRLAERLPQAQVEISPLSGHACLLERQMNL HHHCCCCHHCHHHHEEECCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH RRYLLKPDGVFAPLLLNSAPAH HHHHCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA