| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86605796
Identifier: 86605796
GI number: 86605796
Start: 1132684
End: 1133100
Strand: Reverse
Name: 86605796
Synonym: CYA_1107
Alternate gene names: NA
Gene position: 1133100-1132684 (Counterclockwise)
Preceding gene: 86605797
Following gene: 86605795
Centisome position: 38.64
GC content: 53.96
Gene sequence:
>417_bases ATGGCGATCTCAACCAACTCTCTATCTCCTAACTTTTCTCCATCGACAACTTCGGCTCAAGCTGAGGCCGAACATTACCT CTGGATCTGCACCACCTGCGGATCTCGCTGGGTGAACGGCCAAAAAGAAGGGACTAGCAAAGGAGAAATGCTCCTGGCCG CCTTGCAATCGCAAGTGCTCAATTCCCAATTGCACCTGAAGCCAGTTGCCTGTATGAGCGGCTGCAGCCATGCCTGCGTG ATTGCCCTAGCAGCCCCGGGGAAGATGACCTATGTCTTTGGCGATCTCGATCCAAAAGATGTAGAGCCAATCTTACAAAC GGCGGAGCTGTATTTGACAAAGCCCGATGGGATCCTGCCCTGGGCAGAGCGCCCCATCAAAAAGGGGGTGATTGCCCGCA TTCCGCCAATCCAATAG
Upstream 100 bases:
>100_bases TAGCGATATCCCAGGCTGTTTTTAACTCTCCGGCTGACCACTTTTAGCGAGAACTTTCCAAGTTGATTGTCTGCTTTACG GTTTAGTTTGGATGCAACTT
Downstream 100 bases:
>100_bases GAGCAACCTATGGCCGCTTTCAGTCCCTGGATCACGCCCTTAAACCAGACTTGGCAAGAGGTTTCCCCCACCGGCTGGAC AACCGTTTACGAAGGGATCC
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACV IALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ
Sequences:
>Translated_138_residues MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACV IALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ >Mature_137_residues AISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVLNSQLHLKPVACMSGCSHACVI ALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILPWAERPIKKGVIARIPPIQ
Specific function: Unknown
COG id: COG5469
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14852; Mature: 14721
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH NSQLHLKPVACMSGCSHACVIALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILP CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCCCC WAERPIKKGVIARIPPIQ CCCCHHHCCCCCCCCCCC >Mature Secondary Structure AISTNSLSPNFSPSTTSAQAEAEHYLWICTTCGSRWVNGQKEGTSKGEMLLAALQSQVL CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH NSQLHLKPVACMSGCSHACVIALAAPGKMTYVFGDLDPKDVEPILQTAELYLTKPDGILP CCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCCCC WAERPIKKGVIARIPPIQ CCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA