Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605624

Identifier: 86605624

GI number: 86605624

Start: 931131

End: 931571

Strand: Reverse

Name: 86605624

Synonym: CYA_0922

Alternate gene names: NA

Gene position: 931571-931131 (Counterclockwise)

Preceding gene: 86605626

Following gene: 86605623

Centisome position: 31.76

GC content: 62.36

Gene sequence:

>441_bases
ATGGAACTCTCTTACCGTGGCGTTGGTTACACCCACTCGCCGGCGACGGTGACTGTTTCTCCGGGCAAAGTGGGGGGTCG
CTATCGGGGGCTGGACTGGCGATTTCGCCACCTGAGCAAGCCGGTGGTTTTGCCCACCAAGCTTGACCTGCTCTATCGGG
GCGCGGCCTATCGTTCCGAAGCTGCTGCAGCGCCGGCTCAAACCGTTCAGACAGCCGAGGCACCTGCTCCTGGCCGTTCT
CACGTTCTGGATGAGCTGGCTCGCCGCCTGATGATGGGCCACCAACGGGCGATTCGGGTTCGTCAGCAAGCCATGTTGGT
GCGTGGCACGGAGCGGGTTGGCCTGCAGGCCAATGTGCGCAACTTCTGGAACCGCATCCAAGGAAAGGTGCATCCCACCT
TCCGTCTCACCTATGACCGCAGCCGGGTCAGCATGAGCTAG

Upstream 100 bases:

>100_bases
GCGCCTCAACCCTTGGGACTGTCCACGGGACATCTCAGGTCACTCCTCAGGAAGTGAAGTGGATACAGACCATATACGTT
TGGAGGCGAAGATGAAGATC

Downstream 100 bases:

>100_bases
TTTGCTTTGCCCACCCCAGTTCATCTTCTGGTATGGCGGGAGAGGGATCCCTTTGGATCTGGATGGGGGGTCAGGGGAGG
GGAAAAGGCGCGGCTACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS
HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS

Sequences:

>Translated_146_residues
MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS
HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS
>Mature_146_residues
MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSEAAAAPAQTVQTAEAPAPGRS
HVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVRNFWNRIQGKVHPTFRLTYDRSRVSMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16441; Mature: 16441

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: PS00496 PII_GLNB_UMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSE
CCCCCCCCCEECCCCEEEECCCCCCCEECCCCHHHHHCCCCEECCCHHHHHHCCCCCCCH
AAAAPAQTVQTAEAPAPGRSHVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVR
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHH
NFWNRIQGKVHPTFRLTYDRSRVSMS
HHHHHHCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MELSYRGVGYTHSPATVTVSPGKVGGRYRGLDWRFRHLSKPVVLPTKLDLLYRGAAYRSE
CCCCCCCCCEECCCCEEEECCCCCCCEECCCCHHHHHCCCCEECCCHHHHHHCCCCCCCH
AAAAPAQTVQTAEAPAPGRSHVLDELARRLMMGHQRAIRVRQQAMLVRGTERVGLQANVR
HHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEHHH
NFWNRIQGKVHPTFRLTYDRSRVSMS
HHHHHHCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA