Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605470

Identifier: 86605470

GI number: 86605470

Start: 770446

End: 771204

Strand: Reverse

Name: 86605470

Synonym: CYA_0763

Alternate gene names: NA

Gene position: 771204-770446 (Counterclockwise)

Preceding gene: 86605471

Following gene: 86605468

Centisome position: 26.3

GC content: 61.79

Gene sequence:

>759_bases
ATGGGCGTGCGCAAGATCATCTACGGCATTTTCGGGCAGCGGGCCGGCAGCGTTATTGTCGGCACTTGGAACTGGCTGTG
GGGGATCCCAGTGGACAAGGGCGGCACAGGGGCGGTGATGGTGGCAGAAGAATCGCTGCGGGCCATGCAAGAAACGGTGC
AACGCCTCACCGAAGCCGTCGCCACCCAGGTGGCCGCCTACCAGCGCGCCGAACAGAAATACATGCAAAAGGTGCGCGAG
TACCAGGCCCTGGAGAACAAAGCCCGCCTGGCCGCCCAACGGGGGGATCAAGAAGCTGCCCGCCTGGCCATGGCAGAAGC
GCTGCGCATTGAAGCGATTCTCGGCCCGCTTAAGGAGAATGTGGAAACAGCAGAGCGCTACGTCACCGCTGCCAAGCAAA
AGCTGGCCCGCGAAAAAGAGCGTCTGGCCCTCTACAAGCGCGAGCTGAGCAACCTCAAAGACATCTACGAGGTGAACAAA
GCTCTTGAACAGATGACCCGCGTTAACAACGCCTATAGCATTGACTCGGCCAAGTCCCAATTCGAGGCGGCCAAGAACGC
CATCCAAGCTCGCCAGCTCAAGGCGCGCGCCCTGAGCGAGCTCTCCGAGGATCGCAGCGAGCAACTTGCCGCCCAACTGG
ACGAAATGGCCCTCGACGACGAGGTCTCCCGCCGCCTGGCCATGCTCACCGGCCAAGGAGGCGGCTCGGCCAATCTGCCC
TTGCCGGATCTGGATTTCGAGAAGCGGCTTCCCCAATAG

Upstream 100 bases:

>100_bases
GAGCAAGGGTTTGACTTTGTCCGCCTGCCCCTTTCTGGCAAGCTTCCCAGTTGCAGAGGAAATTGAATACAGTGAAAGGC
AGCAATAGGGAGGGCAAGCC

Downstream 100 bases:

>100_bases
TGGGGATCCCTTCTGGCTATTGCTCCGCCTTGTCGGGGCTTTTCCTTACGCTGAGGTGTCGTTCCCAGGAGATAGGGTAA
ACCTAGTCCTCGGCGAAATC

Product: pspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MGVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQETVQRLTEAVATQVAAYQRAEQKYMQKVRE
YQALENKARLAAQRGDQEAARLAMAEALRIEAILGPLKENVETAERYVTAAKQKLAREKERLALYKRELSNLKDIYEVNK
ALEQMTRVNNAYSIDSAKSQFEAAKNAIQARQLKARALSELSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLP
LPDLDFEKRLPQ

Sequences:

>Translated_252_residues
MGVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQETVQRLTEAVATQVAAYQRAEQKYMQKVRE
YQALENKARLAAQRGDQEAARLAMAEALRIEAILGPLKENVETAERYVTAAKQKLAREKERLALYKRELSNLKDIYEVNK
ALEQMTRVNNAYSIDSAKSQFEAAKNAIQARQLKARALSELSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLP
LPDLDFEKRLPQ
>Mature_251_residues
GVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQETVQRLTEAVATQVAAYQRAEQKYMQKVREY
QALENKARLAAQRGDQEAARLAMAEALRIEAILGPLKENVETAERYVTAAKQKLAREKERLALYKRELSNLKDIYEVNKA
LEQMTRVNNAYSIDSAKSQFEAAKNAIQARQLKARALSELSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLPL
PDLDFEKRLPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28128; Mature: 27997

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQETVQRLTEAV
CCHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ATQVAAYQRAEQKYMQKVREYQALENKARLAAQRGDQEAARLAMAEALRIEAILGPLKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VETAERYVTAAKQKLAREKERLALYKRELSNLKDIYEVNKALEQMTRVNNAYSIDSAKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FEAAKNAIQARQLKARALSELSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LPDLDFEKRLPQ
CCCCCHHHCCCC
>Mature Secondary Structure 
GVRKIIYGIFGQRAGSVIVGTWNWLWGIPVDKGGTGAVMVAEESLRAMQETVQRLTEAV
CHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
ATQVAAYQRAEQKYMQKVREYQALENKARLAAQRGDQEAARLAMAEALRIEAILGPLKEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VETAERYVTAAKQKLAREKERLALYKRELSNLKDIYEVNKALEQMTRVNNAYSIDSAKSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FEAAKNAIQARQLKARALSELSEDRSEQLAAQLDEMALDDEVSRRLAMLTGQGGGSANLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LPDLDFEKRLPQ
CCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA