| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605355
Identifier: 86605355
GI number: 86605355
Start: 653300
End: 653461
Strand: Reverse
Name: 86605355
Synonym: CYA_0641
Alternate gene names: NA
Gene position: 653461-653300 (Counterclockwise)
Preceding gene: 86605356
Following gene: 86605354
Centisome position: 22.28
GC content: 60.49
Gene sequence:
>162_bases ATGACATCCAAAGCTCGACGGGGATCCCCGCTGGAAAAGGGGATCCCTCTACTTTTTGCGCCAAGCTGTCCCTTGGCCGA GGCCCTCTCCACCTGGAGCCCTCCGGCAACGGTTCCTGCCTGTCTGTGTTGCCTGCGAGAAGGTTTCCGCTTCCCTAGCT AG
Upstream 100 bases:
>100_bases TGATCTTGTACGTGCAGACTTCCAGCAAGTCGGAGAGCTGACCTAGGCCCATGAAGGCAAGTCTTACCTCCTGCTGAGGA ACCAAGGCTCACAGTCGACG
Downstream 100 bases:
>100_bases AAATCTATAGCCTTCATCGGAAAACTTGATTTTTGTCTATCCTAGTTTGCCACTAGGATGCCTCTTAAGATTTTTTACAG GATCTCAGTAGGCGATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MTSKARRGSPLEKGIPLLFAPSCPLAEALSTWSPPATVPACLCCLREGFRFPS
Sequences:
>Translated_53_residues MTSKARRGSPLEKGIPLLFAPSCPLAEALSTWSPPATVPACLCCLREGFRFPS >Mature_52_residues TSKARRGSPLEKGIPLLFAPSCPLAEALSTWSPPATVPACLCCLREGFRFPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5663; Mature: 5532
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKARRGSPLEKGIPLLFAPSCPLAEALSTWSPPATVPACLCCLREGFRFPS CCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSKARRGSPLEKGIPLLFAPSCPLAEALSTWSPPATVPACLCCLREGFRFPS CCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA