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The map label for this gene is psbM

Identifier: 86605356

GI number: 86605356

Start: 653521

End: 653628

Strand: Reverse

Name: psbM

Synonym: CYA_0642

Alternate gene names: 86605356

Gene position: 653628-653521 (Counterclockwise)

Preceding gene: 86605357

Following gene: 86605355

Centisome position: 22.29

GC content: 51.85

Gene sequence:

>108_bases
ATGGAGACGAACTACCTGGGCCTTTTGGCCACCATTTTGGTTATTCTGGTGCCCTCGATCTTCCTGGTGATCTTGTACGT
GCAGACTTCCAGCAAGTCGGAGAGCTGA

Upstream 100 bases:

>100_bases
CGGTGAAGACGAAACCCTAGAGCCGGCTTGGCCGCTTTTGGGCAAGGCGTACCTGAGAATGGTATGCTAGCTGCCAGTTG
GGTTTGCGGCGTGTGCAGCT

Downstream 100 bases:

>100_bases
CCTAGGCCCATGAAGGCAAGTCTTACCTCCTGCTGAGGAACCAAGGCTCACAGTCGACGATGACATCCAAAGCTCGACGG
GGATCCCCGCTGGAAAAGGG

Product: photosystem II reaction center protein M

Products: NA

Alternate protein names: PSII-M

Number of amino acids: Translated: 35; Mature: 35

Protein sequence:

>35_residues
METNYLGLLATILVILVPSIFLVILYVQTSSKSES

Sequences:

>Translated_35_residues
METNYLGLLATILVILVPSIFLVILYVQTSSKSES
>Mature_35_residues
METNYLGLLATILVILVPSIFLVILYVQTSSKSES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbM family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBM_SYNJA (Q2JWK3)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474119.1
- ProteinModelPortal:   Q2JWK3
- SMR:   Q2JWK3
- STRING:   Q2JWK3
- GeneID:   3897317
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0642
- TIGR:   CYA_0642
- HOGENOM:   HBG439285
- ProtClustDB:   PRK04989
- BioCyc:   SSP321327:CYA_0642-MONOMER
- HAMAP:   MF_00438
- InterPro:   IPR007826
- TIGRFAMs:   TIGR03038

Pfam domain/function: PF05151 PsbM

EC number: NA

Molecular weight: Translated: 3857; Mature: 3857

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13980844)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNYLGLLATILVILVPSIFLVILYVQTSSKSES
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
METNYLGLLATILVILVPSIFLVILYVQTSSKSES
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA