| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605280
Identifier: 86605280
GI number: 86605280
Start: 578157
End: 578693
Strand: Reverse
Name: 86605280
Synonym: CYA_0564
Alternate gene names: NA
Gene position: 578693-578157 (Counterclockwise)
Preceding gene: 86605281
Following gene: 86605279
Centisome position: 19.73
GC content: 62.01
Gene sequence:
>537_bases ATGTCTGGATGGATCGAGAAAGAGGCGATGCAGGAAGCACTTTGTGGCAGCGGGAGAGAGTCTTTGTGGACCTCAGCGCT GGCGGCGCGGGAGCGGGAGATCCAGCTTTTGCGGGAGCGCAACCGCCTGCTGCAGAGCCAGATCGACCTGTTGGAGCTGC GCCAAGAAAAGCAACAGCGGCAAATTCGCAGCTACGAGGCCGAGATCGAGCAGCTCTACCAAGAAAAGCAGGTGTTGGAG CAGATGCTCCAGGAGCTGCCGGAGCTCTACCGGCGCAAACTTCAGGCCCGCCTGCAGCCCATCCGCGAGCGCATCGCCGC CATGCAGGCAGAAAATCGCCGGCTCAAGAGGGAACTGTACCAGCTCAGCTACCGGCTGCAGCACGTGGATCAACTGGATG CCCCCGGCTGGAAGGTGCAATTGCCGCAGATCCCTCCGCTGCGCCGCCGGGATCCCAAAGCTCTGCCCGCCCAGGGAGCG ACATCTCCTCCCAGGCCCAGTATCGCTCTTGAGGGACAAAGGGAGAAGCCAGAATAG
Upstream 100 bases:
>100_bases AGGCAAGCCCTGGGGGCTCACCCCAGAGAAGGAGGGGCCATTTGCCCCACCCCGCCGAGCCGGATAGAGTGACGGGGGAG GGATCCCTTTCTTTGCAGCT
Downstream 100 bases:
>100_bases GGGAGCCCCCCTGGGATGCCTCAGCATTGCCCAGCAAGAGCGGTTTCGGCGGGGGCGCGCTTGCAAGGCGACTGGAGAGC TCGAAAAAATGGCCGTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLE QMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGA TSPPRPSIALEGQREKPE
Sequences:
>Translated_178_residues MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLE QMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGA TSPPRPSIALEGQREKPE >Mature_177_residues SGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQRQIRSYEAEIEQLYQEKQVLEQ MLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELYQLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGAT SPPRPSIALEGQREKPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21070; Mature: 20938
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQR CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIRSYEAEIEQLYQEKQVLEQMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGATSPPRPSIALEGQREKPE HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure SGWIEKEAMQEALCGSGRESLWTSALAAREREIQLLRERNRLLQSQIDLLELRQEKQQR CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIRSYEAEIEQLYQEKQVLEQMLQELPELYRRKLQARLQPIRERIAAMQAENRRLKRELY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLSYRLQHVDQLDAPGWKVQLPQIPPLRRRDPKALPAQGATSPPRPSIALEGQREKPE HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA