| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605164
Identifier: 86605164
GI number: 86605164
Start: 464359
End: 464856
Strand: Reverse
Name: 86605164
Synonym: CYA_0445
Alternate gene names: NA
Gene position: 464856-464359 (Counterclockwise)
Preceding gene: 86605165
Following gene: 86605163
Centisome position: 15.85
GC content: 58.03
Gene sequence:
>498_bases TTGCTCCCCAAGACCGACTGCTCCATGACAGACACTCGTCCTTGTGCCCCCTGTATCGTAGATAGCGGAATTTTGGTTAA TAAGCGGGATATTTACCGTCTTCTGGCGGATCTGGGGCGGGTTCGCTACTTCGATATTGTCGATGGTCGGGTACGAAAGC AGGGGGAGGGCTATGTGATGGAGGTGTTTCAGGATGCAACGGCGGCTACCTTGGTGGCCAATCGCAGCCTTTATCTCAAC CTAAACAGCTTTGACTACGCCTGCTTGCGGGATCCCTCCCCCTCGGAGGTGGCAGGCCTGGAGGGGGAACGGCCCAGTGT GGTGATCGATCTGGTTCAAGAGAGCCGCATCTTGCGTTTGGTGCCTTTGTCGGATCCGCTATCGGATCCTGCGCAGTTGT GGGCGGACACTCAGGCGTTGCGGGCGGCAGCAGCGGACGCTTTGGGGGCGGGTTGGAGCCTAGAAGAGGAAGACGGTTCT TCCGACCTGCTGGATTGA
Upstream 100 bases:
>100_bases TTAGACTTGTGGGGGGTTGCTATTTTCTAGAGGATTTGCGATGGTTGCTAGCTGTTGTTGAGCATTACTTCTAATTGCTT CTTGCCTGTTGTCGATCCGC
Downstream 100 bases:
>100_bases AAGGGCTCAAAAAAACGTGCCGCCAGGCCCATCTTCGCTCACTCTTGAGGTGACTGTTATTATTCACACTCCCACTGCCT AAAGGCAGGGGATTCTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLPKTDCSMTDTRPCAPCIVDSGILVNKRDIYRLLADLGRVRYFDIVDGRVRKQGEGYVMEVFQDATAATLVANRSLYLN LNSFDYACLRDPSPSEVAGLEGERPSVVIDLVQESRILRLVPLSDPLSDPAQLWADTQALRAAAADALGAGWSLEEEDGS SDLLD
Sequences:
>Translated_165_residues MLPKTDCSMTDTRPCAPCIVDSGILVNKRDIYRLLADLGRVRYFDIVDGRVRKQGEGYVMEVFQDATAATLVANRSLYLN LNSFDYACLRDPSPSEVAGLEGERPSVVIDLVQESRILRLVPLSDPLSDPAQLWADTQALRAAAADALGAGWSLEEEDGS SDLLD >Mature_165_residues MLPKTDCSMTDTRPCAPCIVDSGILVNKRDIYRLLADLGRVRYFDIVDGRVRKQGEGYVMEVFQDATAATLVANRSLYLN LNSFDYACLRDPSPSEVAGLEGERPSVVIDLVQESRILRLVPLSDPLSDPAQLWADTQALRAAAADALGAGWSLEEEDGS SDLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18049; Mature: 18049
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKTDCSMTDTRPCAPCIVDSGILVNKRDIYRLLADLGRVRYFDIVDGRVRKQGEGYVM CCCCCCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHCCEEEEEECCCEEHCCCCCCEE EVFQDATAATLVANRSLYLNLNSFDYACLRDPSPSEVAGLEGERPSVVIDLVQESRILRL HHHHCCHHHHEEECCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEE VPLSDPLSDPAQLWADTQALRAAAADALGAGWSLEEEDGSSDLLD EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPKTDCSMTDTRPCAPCIVDSGILVNKRDIYRLLADLGRVRYFDIVDGRVRKQGEGYVM CCCCCCCCCCCCCCCCCEEECCCEEECHHHHHHHHHHHCCEEEEEECCCEEHCCCCCCEE EVFQDATAATLVANRSLYLNLNSFDYACLRDPSPSEVAGLEGERPSVVIDLVQESRILRL HHHHCCHHHHEEECCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEE VPLSDPLSDPAQLWADTQALRAAAADALGAGWSLEEEDGSSDLLD EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA