Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605163

Identifier: 86605163

GI number: 86605163

Start: 462769

End: 463866

Strand: Reverse

Name: 86605163

Synonym: CYA_0444

Alternate gene names: NA

Gene position: 463866-462769 (Counterclockwise)

Preceding gene: 86605164

Following gene: 86605162

Centisome position: 15.82

GC content: 61.75

Gene sequence:

>1098_bases
ATGATCTGTCTGGGCTGTGGGGCTTTTGGGTTGGGAGGCAGTGTGAAGGATTTTCGGAAGCTTGGCGGCAGAACGTGGAG
CTTGCGCCCGATCGGATCCCTGGTGGCGATGCTCTTGCTGCTGGCGCTCAAGGCTTGCGGGAGAAGTGGTGGTTCCTCTT
CGGTAAGTGTCATTCCTACTCCCATTCCAACCATCGTTCCCACCTCTACTCCAGCTGTCGTCCTCACCCCTACCCCGACT
GTTCTGCCTTCGCTGACGCCTACCTCTGTTCCCCAGTTCACGATCGACCTTCGCTTTCCCGACAACAGCCTCACTCCCAG
TCAGCAAGCCATTGTCCGCAGCGCGGCCTTGAGATGGCAGCAGATCATTGTCGGGGACCAGCCAGATTTGCCCCCCACCT
CTATTCAGGCCGACGCATGCAATCGGGGATTTCCCAGCACGCCGCTCAATTTCCCCATTGACGATCTGTTGGTAGAGGTG
AGGGCGAGAGACCTAGGCAACGAGCGGGTTTTGGGGGGGGCGGCTCCTTGCTTTGTGCGGGCCTCGAATGGCTTGCCGTT
CTATTCAATTGTGCTCTTCAACAGCCAAAACCTCTCGGCTTTGGAAGAGCGGGGGGATCTGCCCATTACTGCCCTGCACG
AGTTGGGCCATGCGCTTGGCTTTTTGCCCAGCGTCTGGGATCCCAAGGGGCTGACGGTAGGGTTGGTGGGGCGGGATCAG
CCGACGCCGCCGGGCTATGACCCCCGCTTTATCGGCCCGCGGGCAGTTGACGCTTTTATCACATTGGGGGGGAACGCCCC
TTCTGTTCCTTTAGAGAATCAGTTTGGGGAGGGATCCCGCGATGCCCATTGGCGGGAGAGCGTCTTGGGCCGCGAGCTGA
TGACCAGCCGCCTCGACCGGGGGGTGCCCAACCCCCTGAGCATCCTCACGGTGGGAGCCATGGCGGATATCGGCTACGCG
GTGAATCCGGCGGCAGCGGATGGCTTTGAGCTGGGGCGCAGCCGGCGCTTCTCGGAGCCGCTGGAGCTGCAGGAGCTGGA
GTTGGCCCTGCCGCTGCGGCGGTTTGATGCCACCGGCAGGCAGGTATGGGATCCCTGA

Upstream 100 bases:

>100_bases
CCACAGAGGTTTCCCCAGCCTCCTAGACATCGCCCATTGAGAATGGGTATGGGTGGCAGAGCCCAGGGCCAATCCTGCTC
GGCAAATGGAGGCAACCGGT

Downstream 100 bases:

>100_bases
GTCGAAAAAAGCATATCTACCTATAGCCAAGCTGCCCGTTCTTAACAATAATGAATGGCCAGTTGCAGAACTTTACGACA
TCGGCAAACTCTTATATGGG

Product: M8 family peptidase

Products: NA

Alternate protein names: Zinc Metalloendopeptidase; Pkd Domain Containing Protein; Parallel Beta-Helix Repeat Protein

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MICLGCGAFGLGGSVKDFRKLGGRTWSLRPIGSLVAMLLLLALKACGRSGGSSSVSVIPTPIPTIVPTSTPAVVLTPTPT
VLPSLTPTSVPQFTIDLRFPDNSLTPSQQAIVRSAALRWQQIIVGDQPDLPPTSIQADACNRGFPSTPLNFPIDDLLVEV
RARDLGNERVLGGAAPCFVRASNGLPFYSIVLFNSQNLSALEERGDLPITALHELGHALGFLPSVWDPKGLTVGLVGRDQ
PTPPGYDPRFIGPRAVDAFITLGGNAPSVPLENQFGEGSRDAHWRESVLGRELMTSRLDRGVPNPLSILTVGAMADIGYA
VNPAAADGFELGRSRRFSEPLELQELELALPLRRFDATGRQVWDP

Sequences:

>Translated_365_residues
MICLGCGAFGLGGSVKDFRKLGGRTWSLRPIGSLVAMLLLLALKACGRSGGSSSVSVIPTPIPTIVPTSTPAVVLTPTPT
VLPSLTPTSVPQFTIDLRFPDNSLTPSQQAIVRSAALRWQQIIVGDQPDLPPTSIQADACNRGFPSTPLNFPIDDLLVEV
RARDLGNERVLGGAAPCFVRASNGLPFYSIVLFNSQNLSALEERGDLPITALHELGHALGFLPSVWDPKGLTVGLVGRDQ
PTPPGYDPRFIGPRAVDAFITLGGNAPSVPLENQFGEGSRDAHWRESVLGRELMTSRLDRGVPNPLSILTVGAMADIGYA
VNPAAADGFELGRSRRFSEPLELQELELALPLRRFDATGRQVWDP
>Mature_365_residues
MICLGCGAFGLGGSVKDFRKLGGRTWSLRPIGSLVAMLLLLALKACGRSGGSSSVSVIPTPIPTIVPTSTPAVVLTPTPT
VLPSLTPTSVPQFTIDLRFPDNSLTPSQQAIVRSAALRWQQIIVGDQPDLPPTSIQADACNRGFPSTPLNFPIDDLLVEV
RARDLGNERVLGGAAPCFVRASNGLPFYSIVLFNSQNLSALEERGDLPITALHELGHALGFLPSVWDPKGLTVGLVGRDQ
PTPPGYDPRFIGPRAVDAFITLGGNAPSVPLENQFGEGSRDAHWRESVLGRELMTSRLDRGVPNPLSILTVGAMADIGYA
VNPAAADGFELGRSRRFSEPLELQELELALPLRRFDATGRQVWDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38967; Mature: 38967

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICLGCGAFGLGGSVKDFRKLGGRTWSLRPIGSLVAMLLLLALKACGRSGGSSSVSVIPT
CEEEECCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
PIPTIVPTSTPAVVLTPTPTVLPSLTPTSVPQFTIDLRFPDNSLTPSQQAIVRSAALRWQ
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
QIIVGDQPDLPPTSIQADACNRGFPSTPLNFPIDDLLVEVRARDLGNERVLGGAAPCFVR
HHEECCCCCCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCEEEE
ASNGLPFYSIVLFNSQNLSALEERGDLPITALHELGHALGFLPSVWDPKGLTVGLVGRDQ
ECCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
PTPPGYDPRFIGPRAVDAFITLGGNAPSVPLENQFGEGSRDAHWRESVLGRELMTSRLDR
CCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GVPNPLSILTVGAMADIGYAVNPAAADGFELGRSRRFSEPLELQELELALPLRRFDATGR
CCCCCHHHEEEHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
QVWDP
CCCCC
>Mature Secondary Structure
MICLGCGAFGLGGSVKDFRKLGGRTWSLRPIGSLVAMLLLLALKACGRSGGSSSVSVIPT
CEEEECCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
PIPTIVPTSTPAVVLTPTPTVLPSLTPTSVPQFTIDLRFPDNSLTPSQQAIVRSAALRWQ
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
QIIVGDQPDLPPTSIQADACNRGFPSTPLNFPIDDLLVEVRARDLGNERVLGGAAPCFVR
HHEECCCCCCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCEEEE
ASNGLPFYSIVLFNSQNLSALEERGDLPITALHELGHALGFLPSVWDPKGLTVGLVGRDQ
ECCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC
PTPPGYDPRFIGPRAVDAFITLGGNAPSVPLENQFGEGSRDAHWRESVLGRELMTSRLDR
CCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GVPNPLSILTVGAMADIGYAVNPAAADGFELGRSRRFSEPLELQELELALPLRRFDATGR
CCCCCHHHEEEHHHHHCCCEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
QVWDP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA