Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605133

Identifier: 86605133

GI number: 86605133

Start: 435204

End: 436229

Strand: Reverse

Name: 86605133

Synonym: CYA_0414

Alternate gene names: NA

Gene position: 436229-435204 (Counterclockwise)

Preceding gene: 86605134

Following gene: 86605132

Centisome position: 14.87

GC content: 58.19

Gene sequence:

>1026_bases
ATGTTCGGCCTGATCGGGCACCTGACCAGCCTGGCCCACGCAAAACGGGTGGCAGATAAGCTGGGGTATTCCGAATATGC
GGAGAGCGACCTGGAATTTTGGTGCATGGCTCCGCCTCAGGTGGTGGACGAGATCGTGGTGACCAGCATCACGGGCCAAA
AAATCTATGGCCAGTACGTCGAATCCTGTTTCCTGCCGGAAATGCTGGCGGGGGGACGGGTGAAGGCGGCCTGTCGCAAG
ATTTTGAATGCGATGGCCTTGGCGCAGCGGCGCGGCTTGAACATCACCACCCTGGGAGGATTTAGCAGCATTATTTTCGA
GAATTTTCGCCTCGACACCCTCAGGCGGGTGCGCAACATCGACCTGGAAATTCGGCGTTTTACCACCGGCAACACCCACA
CGGCCTATATCATCTGTCAGCAATTGCAGGCGGCGGCCCAGCGCTACGCCATGGATTTGGCAGCTGCCACAGTTGCCGTG
GTGGGGGCCACCGGCGATATCGGTAGTGCCATCTGCCAGTGGTTGGTAGCCCACACTTCCCCGGCCAAATTGCTGTTGAT
AGCCCGCGAGCGGCGACGCCTGGAAGAGCTGCAGGCCAAACTTAAAAAAGGGGAGGTCTGTTCCTTGGAAGAGGCCTTGC
CCCGCGCCGATTTCATCGTCTGGGTGGCCAGCATGAGCCAAGGAGTGACCCTCGATCCTCAGGTGCTTCCGGATCCCTGC
GTGATCATCGACGGTGGCTACCCGAAAAACATCGCCTCCAAGTTGCAGCGCAAGGGGCTGTACGTGATCGACGGCGGCAT
GGTGGAACACTCTCTCGATATCGAGTGGAATATTATGCAATTTTTGAATGTGGCCAACCCGGCCCGCCAGCTCTTCGCCT
GCTTTGCCGAGGCGATGCTCCTGGAGTTCGAGGGCCTGTACACCAATTTTAGTTGGGGCCGCAACTTGATCACCCTAGAA
AAGCTGGATTTAATCGGGCAACTGTCCCGCAAGCACGGCTTCCGTCCCCTTATGCCCGAAGCCTAG

Upstream 100 bases:

>100_bases
GGCCTGGCTGGAACGCTCCCTACCCTCTCTGGGTGCGGACATGTTTTGATGGGATCCGGATGGAGCTCATAAAGTTAAGT
ATCGAAGTGAGTGAGCATCT

Downstream 100 bases:

>100_bases
GTTTAGCTGGGCTGACCCCCTGAAAAGCGGTAACTGAGAGGAGGGGCAATCTGAGACAAGGAGATCCCCGCCCTAGCGGG
GGTAGGGATCTGGAATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Shikimate/Quinate 5-Dehydrogenase; Acyl-ACP Reductase; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein; Dehydrogenase Like

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MFGLIGHLTSLAHAKRVADKLGYSEYAESDLEFWCMAPPQVVDEIVVTSITGQKIYGQYVESCFLPEMLAGGRVKAACRK
ILNAMALAQRRGLNITTLGGFSSIIFENFRLDTLRRVRNIDLEIRRFTTGNTHTAYIICQQLQAAAQRYAMDLAAATVAV
VGATGDIGSAICQWLVAHTSPAKLLLIARERRRLEELQAKLKKGEVCSLEEALPRADFIVWVASMSQGVTLDPQVLPDPC
VIIDGGYPKNIASKLQRKGLYVIDGGMVEHSLDIEWNIMQFLNVANPARQLFACFAEAMLLEFEGLYTNFSWGRNLITLE
KLDLIGQLSRKHGFRPLMPEA

Sequences:

>Translated_341_residues
MFGLIGHLTSLAHAKRVADKLGYSEYAESDLEFWCMAPPQVVDEIVVTSITGQKIYGQYVESCFLPEMLAGGRVKAACRK
ILNAMALAQRRGLNITTLGGFSSIIFENFRLDTLRRVRNIDLEIRRFTTGNTHTAYIICQQLQAAAQRYAMDLAAATVAV
VGATGDIGSAICQWLVAHTSPAKLLLIARERRRLEELQAKLKKGEVCSLEEALPRADFIVWVASMSQGVTLDPQVLPDPC
VIIDGGYPKNIASKLQRKGLYVIDGGMVEHSLDIEWNIMQFLNVANPARQLFACFAEAMLLEFEGLYTNFSWGRNLITLE
KLDLIGQLSRKHGFRPLMPEA
>Mature_341_residues
MFGLIGHLTSLAHAKRVADKLGYSEYAESDLEFWCMAPPQVVDEIVVTSITGQKIYGQYVESCFLPEMLAGGRVKAACRK
ILNAMALAQRRGLNITTLGGFSSIIFENFRLDTLRRVRNIDLEIRRFTTGNTHTAYIICQQLQAAAQRYAMDLAAATVAV
VGATGDIGSAICQWLVAHTSPAKLLLIARERRRLEELQAKLKKGEVCSLEEALPRADFIVWVASMSQGVTLDPQVLPDPC
VIIDGGYPKNIASKLQRKGLYVIDGGMVEHSLDIEWNIMQFLNVANPARQLFACFAEAMLLEFEGLYTNFSWGRNLITLE
KLDLIGQLSRKHGFRPLMPEA

Specific function: Unknown

COG id: COG5322

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37896; Mature: 37896

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLIGHLTSLAHAKRVADKLGYSEYAESDLEFWCMAPPQVVDEIVVTSITGQKIYGQYV
CCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHH
ESCFLPEMLAGGRVKAACRKILNAMALAQRRGLNITTLGGFSSIIFENFRLDTLRRVRNI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHCC
DLEIRRFTTGNTHTAYIICQQLQAAAQRYAMDLAAATVAVVGATGDIGSAICQWLVAHTS
CEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC
PAKLLLIARERRRLEELQAKLKKGEVCSLEEALPRADFIVWVASMSQGVTLDPQVLPDPC
CHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHEEEECCCCCCEECCCCCCCCE
VIIDGGYPKNIASKLQRKGLYVIDGGMVEHSLDIEWNIMQFLNVANPARQLFACFAEAML
EEECCCCCHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LEFEGLYTNFSWGRNLITLEKLDLIGQLSRKHGFRPLMPEA
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFGLIGHLTSLAHAKRVADKLGYSEYAESDLEFWCMAPPQVVDEIVVTSITGQKIYGQYV
CCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHH
ESCFLPEMLAGGRVKAACRKILNAMALAQRRGLNITTLGGFSSIIFENFRLDTLRRVRNI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCHHHHHHHHCC
DLEIRRFTTGNTHTAYIICQQLQAAAQRYAMDLAAATVAVVGATGDIGSAICQWLVAHTS
CEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCC
PAKLLLIARERRRLEELQAKLKKGEVCSLEEALPRADFIVWVASMSQGVTLDPQVLPDPC
CHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHEEEECCCCCCEECCCCCCCCE
VIIDGGYPKNIASKLQRKGLYVIDGGMVEHSLDIEWNIMQFLNVANPARQLFACFAEAML
EEECCCCCHHHHHHHHHCCCEEEECCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH
LEFEGLYTNFSWGRNLITLEKLDLIGQLSRKHGFRPLMPEA
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA