| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604889
Identifier: 86604889
GI number: 86604889
Start: 156188
End: 156946
Strand: Reverse
Name: 86604889
Synonym: CYA_0160
Alternate gene names: NA
Gene position: 156946-156188 (Counterclockwise)
Preceding gene: 86604890
Following gene: 86604888
Centisome position: 5.35
GC content: 60.21
Gene sequence:
>759_bases ATGGCGATCATTGTCTTGAGAGCCTGGTATTTGGATTCGGTGTTGTCTGCCTCCCAAGTGCAACAGCGAGCCCCTGACTT GCGCCTAAGCCGTACCGGCCTCCTGAAAACGGCGATGCGAGCCGATTTCCTCGACGATGTGGAGCAGGTGAAGGCCTCTG TCTGGTGGCAGCGCTACTTGGAAGGGGAGCTGGTGGAGTTTTACATCGAGGGCAGCGGCGCCTACAGCATCTCCAACCTC GATTTAATCAGCCGCGAGATCTACTTCAATAAGCGGGCTGCCCTAAGCATCACGGAGCCGGCCATCTACTTCTGTGGCCA ATCAGATTACCCCGACTCCAGCGCCACGCTGCACCAGGCGTTGCAGACGGTGGTGGAGGCCATTAACCGCCATCATCAGC CGGTTCTTCCGCTACAACTGCAGGGATCCCCAGAGACACCCCTCATCGACGCAGCGCTGATTCGCAAGCTCAAGCAGGCG TTGCTGGTGGTGGCCGATGTCACCCCTGTGCAGGTCAATGGCCGGGGGCGGCCTCTGCCCAGCCCACAGGTCTGTCTGGA GCTGGGCTATGCCCTGCAATCGAAGCGCCCCGAGCAACTGCTGCTGGTGCAACTGCCCCGCCACGGCATCGAGGGATCCT TTCCCTTTGAGGTGGAAGGCAGCAGCTTTTTGAAAATCGGCGATCCGCAGCACCTGGTGGATCAACTGGGAGCCGAGCTC CTCCGCCTGCTGCAGCGCCATCGAGTCATCTCCCTCTAA
Upstream 100 bases:
>100_bases GACCCTGGCTCACCGGCTGCTGGATCTGGCCCTGCGCCTAGGCTGACTTGGATAGCCGGCCAAAATCAGGTACCTTTGAG GCTAAGCGCAGAGGGATCCG
Downstream 100 bases:
>100_bases TGGCAGTACCTACTCAAGCCTCCCTGGCAGCAGCTAGACTGCTTTGGAAGGCCGCTGCTGCCGCCGCCACACTTCTGAAA CTATCTATCAGCCTCTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAIIVLRAWYLDSVLSASQVQQRAPDLRLSRTGLLKTAMRADFLDDVEQVKASVWWQRYLEGELVEFYIEGSGAYSISNL DLISREIYFNKRAALSITEPAIYFCGQSDYPDSSATLHQALQTVVEAINRHHQPVLPLQLQGSPETPLIDAALIRKLKQA LLVVADVTPVQVNGRGRPLPSPQVCLELGYALQSKRPEQLLLVQLPRHGIEGSFPFEVEGSSFLKIGDPQHLVDQLGAEL LRLLQRHRVISL
Sequences:
>Translated_252_residues MAIIVLRAWYLDSVLSASQVQQRAPDLRLSRTGLLKTAMRADFLDDVEQVKASVWWQRYLEGELVEFYIEGSGAYSISNL DLISREIYFNKRAALSITEPAIYFCGQSDYPDSSATLHQALQTVVEAINRHHQPVLPLQLQGSPETPLIDAALIRKLKQA LLVVADVTPVQVNGRGRPLPSPQVCLELGYALQSKRPEQLLLVQLPRHGIEGSFPFEVEGSSFLKIGDPQHLVDQLGAEL LRLLQRHRVISL >Mature_251_residues AIIVLRAWYLDSVLSASQVQQRAPDLRLSRTGLLKTAMRADFLDDVEQVKASVWWQRYLEGELVEFYIEGSGAYSISNLD LISREIYFNKRAALSITEPAIYFCGQSDYPDSSATLHQALQTVVEAINRHHQPVLPLQLQGSPETPLIDAALIRKLKQAL LVVADVTPVQVNGRGRPLPSPQVCLELGYALQSKRPEQLLLVQLPRHGIEGSFPFEVEGSSFLKIGDPQHLVDQLGAELL RLLQRHRVISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28200; Mature: 28069
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIIVLRAWYLDSVLSASQVQQRAPDLRLSRTGLLKTAMRADFLDDVEQVKASVWWQRYL CEEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGELVEFYIEGSGAYSISNLDLISREIYFNKRAALSITEPAIYFCGQSDYPDSSATLHQA CCCEEEEEECCCCCEEECCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCHHHHHHH LQTVVEAINRHHQPVLPLQLQGSPETPLIDAALIRKLKQALLVVADVTPVQVNGRGRPLP HHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEHCCCCEEEECCCCCCCC SPQVCLELGYALQSKRPEQLLLVQLPRHGIEGSFPFEVEGSSFLKIGDPQHLVDQLGAEL CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHHH LRLLQRHRVISL HHHHHHHHCCCC >Mature Secondary Structure AIIVLRAWYLDSVLSASQVQQRAPDLRLSRTGLLKTAMRADFLDDVEQVKASVWWQRYL EEEEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGELVEFYIEGSGAYSISNLDLISREIYFNKRAALSITEPAIYFCGQSDYPDSSATLHQA CCCEEEEEECCCCCEEECCHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCCHHHHHHH LQTVVEAINRHHQPVLPLQLQGSPETPLIDAALIRKLKQALLVVADVTPVQVNGRGRPLP HHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHEEHCCCCEEEECCCCCCCC SPQVCLELGYALQSKRPEQLLLVQLPRHGIEGSFPFEVEGSSFLKIGDPQHLVDQLGAEL CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHHH LRLLQRHRVISL HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA