Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is yugF [H]

Identifier: 86604874

GI number: 86604874

Start: 139456

End: 140352

Strand: Reverse

Name: yugF [H]

Synonym: CYA_0145

Alternate gene names: 86604874

Gene position: 140352-139456 (Counterclockwise)

Preceding gene: 86604877

Following gene: 86604872

Centisome position: 4.79

GC content: 65.89

Gene sequence:

>897_bases
TTGGCCCCCCGCGAGGGGCGCTGGTTCTGGCAGGGCCAGTCCATCCGCTACCAACAGGCGGGATCCGCCGGCCCGGCGGT
GGTGCTTATCCACGGTTTTGGGGCCAGCAGCGACCACTGGCGGAAAAATTTGCCGGAGCTGGGGCGGCACTGCCGCGTGT
ACGCCCTTGACCTCCTGGGATTTGGGGGATCCGCCAAGCCCTTGCCGGGATCCCCTTTCCCCTACACCTTTGAAACCTGG
GGCGCCCAGGTGGCCGATTTTGGGCGGGAGGTGGTGGGGGAGCCAGCTTATCTGGTGGGCAACTCCATTGGTTGCATTGT
GGCCTTGCAGGCGGCTGTTTTCGAGCCAGGCCAGGCCTTGGGGGTGGCGATGTTGGATCCCTCACTGCGGCTGTTGCACG
AGCGCAAGCGTCGCCAGATCTCTTGGCTGCGCCGCCGAACCACCCCCCTCATCCAGTCCTTGCTGGGGTGGCCCCCCTTC
GGCCGGTTTTTCTTTGCCCAGATAGCCCAGCCCTGGGCCATTCGCAACATCCTCCTCCAAGCGTATGGGCGCAAGGAAGC
GGTTACGGAAGACCTGGTGCAGCTTTTGCTGCGACCGGCCCTCGATCCGGGAGCGGCAGAGGTGTTCTTGGCCTTTGTGC
GCTACTCCCAGGGGCCCTTGGCCGAGGATCTCCTGCCCCAGGTCACCTGCCCCGTCCTCATCCTCTGGGGAGAGGTGGAT
CCCTGGGAGCCCATTGCTTTGGGGCGGGCCTTGGCCGAGTTCCCCTGCGTGGTGGGGTTCATCCCCCTGCCGGGAGTTGG
CCACTGCCCCCAAGACGAGGCCCCGGAGCTGGTCAACCCGCTGCTGCTGGCTTGGATCCGGGATCCCACCCGAAAACCTG
AGCTCGGGATCCCCTAG

Upstream 100 bases:

>100_bases
GAACTTGCTTCCCAATCCAGATTGTGCCAACAAAAAAGAGCGCTATCCTTCGGGGTGAGATAGGGATTCCATGCTCTCTG
AACAGCCTTCTACAAGCGTC

Downstream 100 bases:

>100_bases
CAACTCCCGCGAGGAGGAAGGTCTGGGTTCTCCCGCCTAAGAGCGACCGAGGTGCTCCAGTTGATCCAGGTTGGGGCCGC
TCAGCCGGAAGGCCTGGCCA

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MAPREGRWFWQGQSIRYQQAGSAGPAVVLIHGFGASSDHWRKNLPELGRHCRVYALDLLGFGGSAKPLPGSPFPYTFETW
GAQVADFGREVVGEPAYLVGNSIGCIVALQAAVFEPGQALGVAMLDPSLRLLHERKRRQISWLRRRTTPLIQSLLGWPPF
GRFFFAQIAQPWAIRNILLQAYGRKEAVTEDLVQLLLRPALDPGAAEVFLAFVRYSQGPLAEDLLPQVTCPVLILWGEVD
PWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLAWIRDPTRKPELGIP

Sequences:

>Translated_298_residues
MAPREGRWFWQGQSIRYQQAGSAGPAVVLIHGFGASSDHWRKNLPELGRHCRVYALDLLGFGGSAKPLPGSPFPYTFETW
GAQVADFGREVVGEPAYLVGNSIGCIVALQAAVFEPGQALGVAMLDPSLRLLHERKRRQISWLRRRTTPLIQSLLGWPPF
GRFFFAQIAQPWAIRNILLQAYGRKEAVTEDLVQLLLRPALDPGAAEVFLAFVRYSQGPLAEDLLPQVTCPVLILWGEVD
PWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLAWIRDPTRKPELGIP
>Mature_297_residues
APREGRWFWQGQSIRYQQAGSAGPAVVLIHGFGASSDHWRKNLPELGRHCRVYALDLLGFGGSAKPLPGSPFPYTFETWG
AQVADFGREVVGEPAYLVGNSIGCIVALQAAVFEPGQALGVAMLDPSLRLLHERKRRQISWLRRRTTPLIQSLLGWPPFG
RFFFAQIAQPWAIRNILLQAYGRKEAVTEDLVQLLLRPALDPGAAEVFLAFVRYSQGPLAEDLLPQVTCPVLILWGEVDP
WEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLAWIRDPTRKPELGIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32906; Mature: 32774

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPREGRWFWQGQSIRYQQAGSAGPAVVLIHGFGASSDHWRKNLPELGRHCRVYALDLLG
CCCCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEEEC
FGGSAKPLPGSPFPYTFETWGAQVADFGREVVGEPAYLVGNSIGCIVALQAAVFEPGQAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHC
GVAMLDPSLRLLHERKRRQISWLRRRTTPLIQSLLGWPPFGRFFFAQIAQPWAIRNILLQ
EEEHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHH
AYGRKEAVTEDLVQLLLRPALDPGAAEVFLAFVRYSQGPLAEDLLPQVTCPVLILWGEVD
HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCC
PWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLAWIRDPTRKPELGIP
CCCHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
APREGRWFWQGQSIRYQQAGSAGPAVVLIHGFGASSDHWRKNLPELGRHCRVYALDLLG
CCCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEEEEC
FGGSAKPLPGSPFPYTFETWGAQVADFGREVVGEPAYLVGNSIGCIVALQAAVFEPGQAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHC
GVAMLDPSLRLLHERKRRQISWLRRRTTPLIQSLLGWPPFGRFFFAQIAQPWAIRNILLQ
EEEHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHH
AYGRKEAVTEDLVQLLLRPALDPGAAEVFLAFVRYSQGPLAEDLLPQVTCPVLILWGEVD
HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCC
PWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLAWIRDPTRKPELGIP
CCCHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]