| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ilvA
Identifier: 86604872
GI number: 86604872
Start: 137266
End: 138777
Strand: Reverse
Name: ilvA
Synonym: CYA_0143
Alternate gene names: 86604872
Gene position: 138777-137266 (Counterclockwise)
Preceding gene: 86604874
Following gene: 86604871
Centisome position: 4.73
GC content: 63.16
Gene sequence:
>1512_bases ATGTATTGTGACTATCTTGTTCAGATCCTCACGGCTCGCGTTTACGACGTCGCCCAAGAAACCCCCCTGGAGCCGGCTTT TAACCTCTCCCGCCGCCTGAACAACCAGGTCTGGCTCAAGCGGGAAGATCTGCAGCCGGTTTTCTCCTTTAAGCTGCGGG GGGCCTACAACAAGATGGCCCACCTGCCTCCGGAGCAACTGGCGCAAGGGGTGATCGCGGCCTCTGCGGGCAACCACGCC CAAGGGGTAGCCCTGGCAGCGCAGCGGCTGGGCACCCACGCGGTCATCGTGATGCCCGTCACCACCCCCCAGGTGAAGAT AGACGCGGTGCGGGCGCGGGGGGCCCAGGTGGTCTTGCACGGCGACACCTTTGACGATGCCTATGCTCACGCGCGGCAAC TGGAAGCCGAGAAAGGTTTGACCTTCATCCATCCGTTCGACGATCCCCTGGTGATCGCTGGCCAGGGCACCATCGGCATG GAGATCCTGCGCCAGTCTCAACAGCCCATCCACGCCATCTTCGTCGCCGTCGGCGGGGGCGGCCTGATCTCGGGCATCGC CGCCTACGTCAAGCGCCTGCGCCCGGAGATCAAAATCATTGGGGTAGAACCGCTGGACGCCGACGCCATGTACCGCTCCC TACGAGCTGGCCGAAGGGTGCGCCTCTCTCAGGTAGGCCTGTTTGCTGATGGGGTGGCGGTGCGAGAGGTGGGGGAAGAA ACCTTCCGCCTCTGTCAGCAGTACGTGGACGAGATCCTCTTGGTGAGCACCGACGACACCTGTGCCGCCATCAAGGATGT CTTTGAAGATACCCGCTCTATTTTGGAGCCCGCCGGCGCCTTGGCCATTGCCGGCCTCAAAGCCTACGTCAGCCGCACCG GCATCCAGGGACAGACCCTGGTGGCGGTGGCCAGCGGGGCCAATATGAACTTCGACCGCCTGCGCTTTGTGGCCGAGCGA GCCGAGATCGGCGAACAGCGGGAGGCCATTTTCGCCGTCACCATCCCCGAAGAGCGGGGCAGCCTGCGTCGGTTCTGCGC CCACATCGGCCAGCGCAACCTCACCGAGTTCAACTACCGCATTGCCGATACCCACGAAGCTCACATCTTTGTCGGCCTAC AGGTGCGGGATCGGGCCGATGCCCAGGCAGCGGCCCTGGATCTGGAGCGGGCTGGCTTTAAGACCTTGGATCTCACCGAC GACGAGCTGGCCAAGCTGCATCTACGCCACATGGTGGGGGGGCGCTCCCCCCTGGCCGAGAACGAGCTGCTCTACCGCTT CGAGTTCCCGGAGCGGCCCGGGGCCCTGATGCAGTTCTTGTCTTGCATGAGCCCCAACTGGAACATCAGCCTCTTTCACT ACCGCAACAACGGCGCCGACTACGGTCGCGTCCTCATCGGCATGCAAGTGCCCACCTCGGAAATGCCCGCCTGGCAGCGC TTTCTGGATACCCTGAACTATCGCTACTGGGACGAAAGCCACAATCCGGCCTACAAACTCTTCCTAGCCTAA
Upstream 100 bases:
>100_bases GGATCCCTGGGATAATATCCATTGCCCGTTTGAGCAGCCCGCACCACCGGGAGCAACGTTTTTCGACATTTTTCAACCCT ATCGACGTCGATACATCCCG
Downstream 100 bases:
>100_bases TCAGTGTCGGCTTGTTGCGGGGGTGAACAAAGTTGTAAACAAAACTTTACAGTCCTATGTAGAGCGCGCTACGCTAGTAG AGAAAAAGCAAGGAGAATCC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MYCDYLVQILTARVYDVAQETPLEPAFNLSRRLNNQVWLKREDLQPVFSFKLRGAYNKMAHLPPEQLAQGVIAASAGNHA QGVALAAQRLGTHAVIVMPVTTPQVKIDAVRARGAQVVLHGDTFDDAYAHARQLEAEKGLTFIHPFDDPLVIAGQGTIGM EILRQSQQPIHAIFVAVGGGGLISGIAAYVKRLRPEIKIIGVEPLDADAMYRSLRAGRRVRLSQVGLFADGVAVREVGEE TFRLCQQYVDEILLVSTDDTCAAIKDVFEDTRSILEPAGALAIAGLKAYVSRTGIQGQTLVAVASGANMNFDRLRFVAER AEIGEQREAIFAVTIPEERGSLRRFCAHIGQRNLTEFNYRIADTHEAHIFVGLQVRDRADAQAAALDLERAGFKTLDLTD DELAKLHLRHMVGGRSPLAENELLYRFEFPERPGALMQFLSCMSPNWNISLFHYRNNGADYGRVLIGMQVPTSEMPAWQR FLDTLNYRYWDESHNPAYKLFLA
Sequences:
>Translated_503_residues MYCDYLVQILTARVYDVAQETPLEPAFNLSRRLNNQVWLKREDLQPVFSFKLRGAYNKMAHLPPEQLAQGVIAASAGNHA QGVALAAQRLGTHAVIVMPVTTPQVKIDAVRARGAQVVLHGDTFDDAYAHARQLEAEKGLTFIHPFDDPLVIAGQGTIGM EILRQSQQPIHAIFVAVGGGGLISGIAAYVKRLRPEIKIIGVEPLDADAMYRSLRAGRRVRLSQVGLFADGVAVREVGEE TFRLCQQYVDEILLVSTDDTCAAIKDVFEDTRSILEPAGALAIAGLKAYVSRTGIQGQTLVAVASGANMNFDRLRFVAER AEIGEQREAIFAVTIPEERGSLRRFCAHIGQRNLTEFNYRIADTHEAHIFVGLQVRDRADAQAAALDLERAGFKTLDLTD DELAKLHLRHMVGGRSPLAENELLYRFEFPERPGALMQFLSCMSPNWNISLFHYRNNGADYGRVLIGMQVPTSEMPAWQR FLDTLNYRYWDESHNPAYKLFLA >Mature_503_residues MYCDYLVQILTARVYDVAQETPLEPAFNLSRRLNNQVWLKREDLQPVFSFKLRGAYNKMAHLPPEQLAQGVIAASAGNHA QGVALAAQRLGTHAVIVMPVTTPQVKIDAVRARGAQVVLHGDTFDDAYAHARQLEAEKGLTFIHPFDDPLVIAGQGTIGM EILRQSQQPIHAIFVAVGGGGLISGIAAYVKRLRPEIKIIGVEPLDADAMYRSLRAGRRVRLSQVGLFADGVAVREVGEE TFRLCQQYVDEILLVSTDDTCAAIKDVFEDTRSILEPAGALAIAGLKAYVSRTGIQGQTLVAVASGANMNFDRLRFVAER AEIGEQREAIFAVTIPEERGSLRRFCAHIGQRNLTEFNYRIADTHEAHIFVGLQVRDRADAQAAALDLERAGFKTLDLTD DELAKLHLRHMVGGRSPLAENELLYRFEFPERPGALMQFLSCMSPNWNISLFHYRNNGADYGRVLIGMQVPTSEMPAWQR FLDTLNYRYWDESHNPAYKLFLA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=328, Percent_Identity=31.7073170731707, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI33469958, Length=314, Percent_Identity=29.9363057324841, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI19923959, Length=312, Percent_Identity=27.5641025641026, Blast_Score=84, Evalue=5e-16, Organism=Escherichia coli, GI1790207, Length=501, Percent_Identity=52.8942115768463, Blast_Score=513, Evalue=1e-146, Organism=Escherichia coli, GI1789505, Length=307, Percent_Identity=38.1107491856677, Blast_Score=174, Evalue=9e-45, Organism=Escherichia coli, GI1789235, Length=239, Percent_Identity=30.1255230125523, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71991565, Length=336, Percent_Identity=33.0357142857143, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17537387, Length=324, Percent_Identity=33.641975308642, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17508781, Length=262, Percent_Identity=33.206106870229, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320930, Length=514, Percent_Identity=52.5291828793774, Blast_Score=499, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=36.963696369637, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6319788, Length=286, Percent_Identity=27.972027972028, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6322024, Length=145, Percent_Identity=29.6551724137931, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355833, Length=329, Percent_Identity=32.2188449848024, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24645328, Length=250, Percent_Identity=30.8, Blast_Score=93, Evalue=5e-19,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55988; Mature: 55988
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCDYLVQILTARVYDVAQETPLEPAFNLSRRLNNQVWLKREDLQPVFSFKLRGAYNKMA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHH HLPPEQLAQGVIAASAGNHAQGVALAAQRLGTHAVIVMPVTTPQVKIDAVRARGAQVVLH CCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCEEEEE GDTFDDAYAHARQLEAEKGLTFIHPFDDPLVIAGQGTIGMEILRQSQQPIHAIFVAVGGG CCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCC GLISGIAAYVKRLRPEIKIIGVEPLDADAMYRSLRAGRRVRLSQVGLFADGVAVREVGEE HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEHHHCCEEECCHHHHHHHHH TFRLCQQYVDEILLVSTDDTCAAIKDVFEDTRSILEPAGALAIAGLKAYVSRTGIQGQTL HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE VAVASGANMNFDRLRFVAERAEIGEQREAIFAVTIPEERGSLRRFCAHIGQRNLTEFNYR EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCEEEE IADTHEAHIFVGLQVRDRADAQAAALDLERAGFKTLDLTDDELAKLHLRHMVGGRSPLAE EECCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCC NELLYRFEFPERPGALMQFLSCMSPNWNISLFHYRNNGADYGRVLIGMQVPTSEMPAWQR CCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHH FLDTLNYRYWDESHNPAYKLFLA HHHHHCCEECCCCCCCEEEEEEC >Mature Secondary Structure MYCDYLVQILTARVYDVAQETPLEPAFNLSRRLNNQVWLKREDLQPVFSFKLRGAYNKMA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHCCHHHHHH HLPPEQLAQGVIAASAGNHAQGVALAAQRLGTHAVIVMPVTTPQVKIDAVRARGAQVVLH CCCHHHHHCCEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCEEEEE GDTFDDAYAHARQLEAEKGLTFIHPFDDPLVIAGQGTIGMEILRQSQQPIHAIFVAVGGG CCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCHHHHHHHCCCCCEEEEEEEECCC GLISGIAAYVKRLRPEIKIIGVEPLDADAMYRSLRAGRRVRLSQVGLFADGVAVREVGEE HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEHHHCCEEECCHHHHHHHHH TFRLCQQYVDEILLVSTDDTCAAIKDVFEDTRSILEPAGALAIAGLKAYVSRTGIQGQTL HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE VAVASGANMNFDRLRFVAERAEIGEQREAIFAVTIPEERGSLRRFCAHIGQRNLTEFNYR EEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCEEEE IADTHEAHIFVGLQVRDRADAQAAALDLERAGFKTLDLTDDELAKLHLRHMVGGRSPLAE EECCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCC NELLYRFEFPERPGALMQFLSCMSPNWNISLFHYRNNGADYGRVLIGMQVPTSEMPAWQR CCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCHHHHH FLDTLNYRYWDESHNPAYKLFLA HHHHHCCEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA