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The map label for this gene is ypdP [H]

Identifier: 86604822

GI number: 86604822

Start: 89675

End: 90367

Strand: Reverse

Name: ypdP [H]

Synonym: CYA_0092

Alternate gene names: 86604822

Gene position: 90367-89675 (Counterclockwise)

Preceding gene: 86604823

Following gene: 86604821

Centisome position: 3.08

GC content: 59.45

Gene sequence:

>693_bases
ATGTCTGAGAGGGTTTTTGAGCGCGCCTATCGGCACCTGGATGCGGTGACGGCCCTGTTTGTGGCTGTGCTGCTGATCTC
CAACATCGCCTCCACCAAGATCGTGCTCTTGGGGCCGTTTACGTTCGATGGCGGCACCGTCCTTTTTCCCCTCAGCTACA
TTTTCGGCGACATCCTCACGGAGGTCTACGGCTATGCCCGCTCGCGGCGGGTGATCTGGCTGGGATTTATCTCGGCGGCC
CTGATGTCGGCGACCTTGATGATCGTGGGATCCCTGCCGGCAGCCCCCGACTGGCCCTACCAGGAAGCCTACAAACAGAT
TCTCGGCCTTACCCCGCGCATTGTACTGGCCAGCCTAATTGCCTACTGGAGCGGCAGCTTTGCCAATGCCTATGTGCTGG
CCCGCCTGAAGGTGTGGACGCGGGGACGCTGGCTGTGGACACGCACCATCAGCTCCACCCTGGTGGGCCAGGCGGTGGAT
ACGGGCCTGTTTATTCTCATCGCCTTCTGGGGGGTGTTTCCCGGTCTGATGAGCCTCATTGTCTCCAACTACGTGTTCAA
GTGTGCCGTTGAGGCGGTCTGTACGCCCCTGACCTATGTCATCACCGGCTGGCTGAAGCAGCAAGAACAGGAAGACTACT
TTGACGTGGCAACCGACTTCAACCCTTTCCGAATGCAGTCCGTATCTGGGTAG

Upstream 100 bases:

>100_bases
AGATCCGTAAACTCACCAGCGAGGTGGAACGGCACAGCCAGGGCTTGGCCTTGATCGTCAAGGAGCTAAAGCACATCCGC
AAGCTGTTGGGGGGATCCTG

Downstream 100 bases:

>100_bases
TTCATTCGTCCATGGCTGCCCCGACGGATATGGCCAAAAGAGGGATCCCAGTTTTGGTATAGTCAGCTAGAAACCGCAGG
AGCCCCGCCCTGTACCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSERVFERAYRHLDAVTALFVAVLLISNIASTKIVLLGPFTFDGGTVLFPLSYIFGDILTEVYGYARSRRVIWLGFISAA
LMSATLMIVGSLPAAPDWPYQEAYKQILGLTPRIVLASLIAYWSGSFANAYVLARLKVWTRGRWLWTRTISSTLVGQAVD
TGLFILIAFWGVFPGLMSLIVSNYVFKCAVEAVCTPLTYVITGWLKQQEQEDYFDVATDFNPFRMQSVSG

Sequences:

>Translated_230_residues
MSERVFERAYRHLDAVTALFVAVLLISNIASTKIVLLGPFTFDGGTVLFPLSYIFGDILTEVYGYARSRRVIWLGFISAA
LMSATLMIVGSLPAAPDWPYQEAYKQILGLTPRIVLASLIAYWSGSFANAYVLARLKVWTRGRWLWTRTISSTLVGQAVD
TGLFILIAFWGVFPGLMSLIVSNYVFKCAVEAVCTPLTYVITGWLKQQEQEDYFDVATDFNPFRMQSVSG
>Mature_229_residues
SERVFERAYRHLDAVTALFVAVLLISNIASTKIVLLGPFTFDGGTVLFPLSYIFGDILTEVYGYARSRRVIWLGFISAAL
MSATLMIVGSLPAAPDWPYQEAYKQILGLTPRIVLASLIAYWSGSFANAYVLARLKVWTRGRWLWTRTISSTLVGQAVDT
GLFILIAFWGVFPGLMSLIVSNYVFKCAVEAVCTPLTYVITGWLKQQEQEDYFDVATDFNPFRMQSVSG

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25698; Mature: 25567

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERVFERAYRHLDAVTALFVAVLLISNIASTKIVLLGPFTFDGGTVLFPLSYIFGDILT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHHH
EVYGYARSRRVIWLGFISAALMSATLMIVGSLPAAPDWPYQEAYKQILGLTPRIVLASLI
HHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
AYWSGSFANAYVLARLKVWTRGRWLWTRTISSTLVGQAVDTGLFILIAFWGVFPGLMSLI
HHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSNYVFKCAVEAVCTPLTYVITGWLKQQEQEDYFDVATDFNPFRMQSVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure 
SERVFERAYRHLDAVTALFVAVLLISNIASTKIVLLGPFTFDGGTVLFPLSYIFGDILT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCCHHHHHHHHHHHHHHH
EVYGYARSRRVIWLGFISAALMSATLMIVGSLPAAPDWPYQEAYKQILGLTPRIVLASLI
HHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH
AYWSGSFANAYVLARLKVWTRGRWLWTRTISSTLVGQAVDTGLFILIAFWGVFPGLMSLI
HHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSNYVFKCAVEAVCTPLTYVITGWLKQQEQEDYFDVATDFNPFRMQSVSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]