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The map label for this gene is psbZ

Identifier: 86604820

GI number: 86604820

Start: 88002

End: 88187

Strand: Reverse

Name: psbZ

Synonym: CYA_0090

Alternate gene names: 86604820

Gene position: 88187-88002 (Counterclockwise)

Preceding gene: 86604821

Following gene: 86604819

Centisome position: 3.01

GC content: 53.23

Gene sequence:

>186_bases
ATGATGCTCATTTTCCAAATTGCTTTGTTGGTGTTGGTGCTTTACAGCTTGCTGTTGGTGGTGGCGGTGCCGGTGCTCTT
CAGCTCGGCCAGCGACTGGAGCCGGGCCAAGAATGTGATTTTGGTGGGATCCCTGCTCTGGGTGCTGATGGTGATCGGGG
TGGGGGTACTTAGTTTCTTTAAGTGA

Upstream 100 bases:

>100_bases
CTACCCTGCCGCCGGTGCGCAGCGAGCCGGATCAGGTTGGGCAGCCCGGTGTTGTCGGGAGCTTTTATCCAAGACAAGAC
TTTTGTGAGGGATCCAGACC

Downstream 100 bases:

>100_bases
TATCCTTCGACGCCCATCCCCCAGGCTCCTGGACGTTGCAGAGCATCAGGGTTGCGACTGCAAGGTTCTGGGGGCGGGGA
AAACTGCGCATCTCCGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: PSII-Z

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MMLIFQIALLVLVLYSLLLVVAVPVLFSSASDWSRAKNVILVGSLLWVLMVIGVGVLSFFK

Sequences:

>Translated_61_residues
MMLIFQIALLVLVLYSLLLVVAVPVLFSSASDWSRAKNVILVGSLLWVLMVIGVGVLSFFK
>Mature_61_residues
MMLIFQIALLVLVLYSLLLVVAVPVLFSSASDWSRAKNVILVGSLLWVLMVIGVGVLSFFK

Specific function: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Associated with the photosystem II complex (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbZ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBZ_SYNJA (Q2JXZ7)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_473583.1
- ProteinModelPortal:   Q2JXZ7
- SMR:   Q2JXZ7
- STRING:   Q2JXZ7
- GeneID:   3897118
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0090
- TIGR:   CYA_0090
- OMA:   VAYASPQ
- ProtClustDB:   CLSK750058
- BioCyc:   SSP321327:CYA_0090-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00644
- InterPro:   IPR002644
- Gene3D:   G3DSA:1.10.287.740
- TIGRFAMs:   TIGR03043

Pfam domain/function: PF01737 Ycf9

EC number: NA

Molecular weight: Translated: 6694; Mature: 6694

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11e5f888)-; HASH(0x11c5de2c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLIFQIALLVLVLYSLLLVVAVPVLFSSASDWSRAKNVILVGSLLWVLMVIGVGVLSFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
H
>Mature Secondary Structure
MMLIFQIALLVLVLYSLLLVVAVPVLFSSASDWSRAKNVILVGSLLWVLMVIGVGVLSFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
K
H

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA