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The map label for this gene is erfK [H]

Identifier: 86361200

GI number: 86361200

Start: 531041

End: 531715

Strand: Direct

Name: erfK [H]

Synonym: RHE_PF00470

Alternate gene names: 86361200

Gene position: 531041-531715 (Clockwise)

Preceding gene: 86361197

Following gene: 86361201

Centisome position: 82.65

GC content: 59.41

Gene sequence:

>675_bases
ATGGTGTGGACTCGCAGAAGTATTATGCTTGGTGGATTGGCGTTGCTGGGGACCAGCGCCGTCAGCAAACCGGCAGCCGC
CGCGGCATCTTCTTATTTCGATGGCGCAGCCGTCGACAACGGCGTGACGTTTCGCAGCACCAATTTCGCTAAAATCGACA
GGCGCTGGCACCGCCAGGTCGTCAAATATTTCAGCAGCGAACCGATTGGTACCGTTGTCGTCGATACAAGGCACCATTTT
CTCTACCTGATCATGGAGAACAAGACCGCCATCCGCTATGGAGTCGGGGTCGGCCGCGAAGGCTTCAAATGGTTTGGCCG
CGCCACCATCGACGCCAAATCGCTCTGGCCGCGCTGGACGCCGCCGCCGGAGATGCGCAAACGCCATCCCGAACTGCCGG
AATTCGTCTCGGGTGGCTCACCGAAGAATCCGCTTGGCCCCCGCGCCATGTATCTGCATCGCGACGGCGTCGACACCGGC
TATCGGTTTCACGGCACGCTGGAGCCATGGAGCATCGGCAAGGACGCCTCCAGCGGCTGTATCCGCATGTTCAATGAAGA
CGCCATCGATCTTTATCAGCGCTGCCCCATTGGAACTGCTGTACAGGTTCTGCCGCATATTGCCGACCAGGCTGAGGGCG
CCACTCAGGTTAGCGAAACAACTCCGGTCGAATGA

Upstream 100 bases:

>100_bases
TCCCTATCGATCTTGATCGGAAGAGGAGTTTCCTATTGAGACAAATAAAAAATCTGGTTTACTGCACTTCGCTTGTTGTC
TTTCAGGGGGAGTTTAGCCG

Downstream 100 bases:

>100_bases
GGAATATCACCCCTATGTCTGCGATGATCGGATACACCAAGCGCCTCGCTGGCGCAGCCATGCTCTTGGCGCTCGCCGCC
TGCTCCACCACCGAGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVWTRRSIMLGGLALLGTSAVSKPAAAAASSYFDGAAVDNGVTFRSTNFAKIDRRWHRQVVKYFSSEPIGTVVVDTRHHF
LYLIMENKTAIRYGVGVGREGFKWFGRATIDAKSLWPRWTPPPEMRKRHPELPEFVSGGSPKNPLGPRAMYLHRDGVDTG
YRFHGTLEPWSIGKDASSGCIRMFNEDAIDLYQRCPIGTAVQVLPHIADQAEGATQVSETTPVE

Sequences:

>Translated_224_residues
MVWTRRSIMLGGLALLGTSAVSKPAAAAASSYFDGAAVDNGVTFRSTNFAKIDRRWHRQVVKYFSSEPIGTVVVDTRHHF
LYLIMENKTAIRYGVGVGREGFKWFGRATIDAKSLWPRWTPPPEMRKRHPELPEFVSGGSPKNPLGPRAMYLHRDGVDTG
YRFHGTLEPWSIGKDASSGCIRMFNEDAIDLYQRCPIGTAVQVLPHIADQAEGATQVSETTPVE
>Mature_224_residues
MVWTRRSIMLGGLALLGTSAVSKPAAAAASSYFDGAAVDNGVTFRSTNFAKIDRRWHRQVVKYFSSEPIGTVVVDTRHHF
LYLIMENKTAIRYGVGVGREGFKWFGRATIDAKSLWPRWTPPPEMRKRHPELPEFVSGGSPKNPLGPRAMYLHRDGVDTG
YRFHGTLEPWSIGKDASSGCIRMFNEDAIDLYQRCPIGTAVQVLPHIADQAEGATQVSETTPVE

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=143, Percent_Identity=34.965034965035, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787040, Length=143, Percent_Identity=32.1678321678322, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787968, Length=140, Percent_Identity=35, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 24866; Mature: 24866

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWTRRSIMLGGLALLGTSAVSKPAAAAASSYFDGAAVDNGVTFRSTNFAKIDRRWHRQV
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHH
VKYFSSEPIGTVVVDTRHHFLYLIMENKTAIRYGVGVGREGFKWFGRATIDAKSLWPRWT
HHHHCCCCCCEEEEECCCEEEEEEEECCEEEEECCCCCCHHHHHHCCEEECHHHCCCCCC
PPPEMRKRHPELPEFVSGGSPKNPLGPRAMYLHRDGVDTGYRFHGTLEPWSIGKDASSGC
CCHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCH
IRMFNEDAIDLYQRCPIGTAVQVLPHIADQAEGATQVSETTPVE
HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVWTRRSIMLGGLALLGTSAVSKPAAAAASSYFDGAAVDNGVTFRSTNFAKIDRRWHRQV
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHH
VKYFSSEPIGTVVVDTRHHFLYLIMENKTAIRYGVGVGREGFKWFGRATIDAKSLWPRWT
HHHHCCCCCCEEEEECCCEEEEEEEECCEEEEECCCCCCHHHHHHCCEEECHHHCCCCCC
PPPEMRKRHPELPEFVSGGSPKNPLGPRAMYLHRDGVDTGYRFHGTLEPWSIGKDASSGC
CCHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCH
IRMFNEDAIDLYQRCPIGTAVQVLPHIADQAEGATQVSETTPVE
HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]