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The map label for this gene is omp16 [H]

Identifier: 86361201

GI number: 86361201

Start: 531730

End: 532266

Strand: Direct

Name: omp16 [H]

Synonym: RHE_PF00471

Alternate gene names: 86361201

Gene position: 531730-532266 (Clockwise)

Preceding gene: 86361200

Following gene: 86361204

Centisome position: 82.76

GC content: 63.87

Gene sequence:

>537_bases
ATGTCTGCGATGATCGGATACACCAAGCGCCTCGCTGGCGCAGCCATGCTCTTGGCGCTCGCCGCCTGCTCCACCACCGA
GGTCGCCTCCCTGGAAGAACCGGCGGCGGTGCCGATGACCGGGCAGACCAACGACCCCGCCCCCGGCTTCGAGAGTGTAG
CGCCGGGCAGCGAGGAGGATTTCATTCTTAGTGTCGGCCGACGGATCTACTTCAAACAGGACTCCGCCGCGCTCGATTCC
GTCGCCATGGCCACTCTGGATAATCAAGCAGCCTGGCTCAACAAGAACCCGACCTGGCTGCTCAAGCTTCAGGGATTTGC
CGACGATTCCGGCTCCGCCGCCCAAATGCAGACGCTCTCGCAGAAACGTGCCGATGCGGCGATGGCCTATCTGACCTCAA
AGGGCGTGGACCCCAAGCGCATGTGGGCCAAGGGCTACGGCAACGACCGCGAAGTCCGCGACTGCACAGAGCGCTCCTGC
AAGGTGCAGAACCGGCGCGTCGTTACCAATCTGCGCACCCAGCCGGATGCGGTCTGA

Upstream 100 bases:

>100_bases
TTGGAACTGCTGTACAGGTTCTGCCGCATATTGCCGACCAGGCTGAGGGCGCCACTCAGGTTAGCGAAACAACTCCGGTC
GAATGAGGAATATCACCCCT

Downstream 100 bases:

>100_bases
TGCAGGTGGACCTGCAGGAGCGCCGAAAGAGGGCTACGCTTATTGAGCCGGGATTGCGGCAAGAGAGTTCGAGGGGAGCA
CAATCTCAGTCCACCTCGTT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSAMIGYTKRLAGAAMLLALAACSTTEVASLEEPAAVPMTGQTNDPAPGFESVAPGSEEDFILSVGRRIYFKQDSAALDS
VAMATLDNQAAWLNKNPTWLLKLQGFADDSGSAAQMQTLSQKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERSC
KVQNRRVVTNLRTQPDAV

Sequences:

>Translated_178_residues
MSAMIGYTKRLAGAAMLLALAACSTTEVASLEEPAAVPMTGQTNDPAPGFESVAPGSEEDFILSVGRRIYFKQDSAALDS
VAMATLDNQAAWLNKNPTWLLKLQGFADDSGSAAQMQTLSQKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERSC
KVQNRRVVTNLRTQPDAV
>Mature_177_residues
SAMIGYTKRLAGAAMLLALAACSTTEVASLEEPAAVPMTGQTNDPAPGFESVAPGSEEDFILSVGRRIYFKQDSAALDSV
AMATLDNQAAWLNKNPTWLLKLQGFADDSGSAAQMQTLSQKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERSCK
VQNRRVVTNLRTQPDAV

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19211; Mature: 19080

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMIGYTKRLAGAAMLLALAACSTTEVASLEEPAAVPMTGQTNDPAPGFESVAPGSEED
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQGFADDSGSAAQMQTLS
HHEECCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHH
QKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERSCKVQNRRVVTNLRTQPDAV
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SAMIGYTKRLAGAAMLLALAACSTTEVASLEEPAAVPMTGQTNDPAPGFESVAPGSEED
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTWLLKLQGFADDSGSAAQMQTLS
HHEECCCEEEEECCCHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHH
QKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERSCKVQNRRVVTNLRTQPDAV
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]