| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361157
Identifier: 86361157
GI number: 86361157
Start: 480069
End: 480794
Strand: Reverse
Name: 86361157
Synonym: RHE_PF00427
Alternate gene names: NA
Gene position: 480794-480069 (Counterclockwise)
Preceding gene: 86361163
Following gene: 86361147
Centisome position: 74.83
GC content: 63.36
Gene sequence:
>726_bases GTGACACCCCGGCATGTCCTCTGCTTCCTCGGGCGGGATCGCGACCTCTGCCAATTGTCCGAAGCGGCGGCCAAAGCCGT CCGTGATTTCGCCACCGGCTTCAGCGTCGATGAGGATTATTCGCAGGCAGAGCCGGATGACCGCATGAACCGGTCATTCG ATGTCTGCTGGGATCGGGTCGAACCCGATGCATGGAACGAGGCGGACGAGAAAGCCGTCGCCGATCATCAATCCGTCCTC TATGTCCTCGGGCCGAGCATGGCGCGAGCAGACACCGTCGAGGTGTCGATGACGGCCCTGCGCCTCGTCGAGCGGTTGAT CGAGGCGGGAGCTGTTGCCGTCAAGGGCGAAAGCGCCGGTATCGCACATGGATTGGATCGATGGAGAGAGCTGATCGGCC AAGGCGTCGAGGCGCAGAACGCCGGCGATCCGCTCGCCCAGCAGCGCGTCGGTCGCCTGGCCTTCGCAAAGCGGCCGCTC TCGGCGCGCGGTTATCTGGAAAGCGTCGGCTTCCATCTCGTGGGGCTGCCGGATGTCTATGTTCCGGAGACGGCGGGCAG CGAAAGGCAGGTCGTTGCCATCATCGATGCAGTTGCCGACGAGATCGGCAAGCAGGGTCTCGATCGGACGCTCAAGGCGC GGGGCGCAAGCCTCTCCTTCGATTCCACCTATGACGTGGACGAGTTCAAGTTTAATCCCTACGGCATCGTCAAGGTCGCC GGGTGA
Upstream 100 bases:
>100_bases TCGCGCGCTGTTGGGGTCTCTATGGGCCCTGATCGGCTGGAAACCTTCTTTCGCTATCGACACCGGCCCGGAAACAACCA CCCAGGAGGAGGCGTCGTCG
Downstream 100 bases:
>100_bases GCCGGCCCCATCTCGGGTAATTGGCCTGCGACAGGGCGAAGCGCTGGATCGGCTCTGCAGCGACTCGCGCATACGCCTGT CATTCAATCGGTCTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTPRHVLCFLGRDRDLCQLSEAAAKAVRDFATGFSVDEDYSQAEPDDRMNRSFDVCWDRVEPDAWNEADEKAVADHQSVL YVLGPSMARADTVEVSMTALRLVERLIEAGAVAVKGESAGIAHGLDRWRELIGQGVEAQNAGDPLAQQRVGRLAFAKRPL SARGYLESVGFHLVGLPDVYVPETAGSERQVVAIIDAVADEIGKQGLDRTLKARGASLSFDSTYDVDEFKFNPYGIVKVA G
Sequences:
>Translated_241_residues MTPRHVLCFLGRDRDLCQLSEAAAKAVRDFATGFSVDEDYSQAEPDDRMNRSFDVCWDRVEPDAWNEADEKAVADHQSVL YVLGPSMARADTVEVSMTALRLVERLIEAGAVAVKGESAGIAHGLDRWRELIGQGVEAQNAGDPLAQQRVGRLAFAKRPL SARGYLESVGFHLVGLPDVYVPETAGSERQVVAIIDAVADEIGKQGLDRTLKARGASLSFDSTYDVDEFKFNPYGIVKVA G >Mature_240_residues TPRHVLCFLGRDRDLCQLSEAAAKAVRDFATGFSVDEDYSQAEPDDRMNRSFDVCWDRVEPDAWNEADEKAVADHQSVLY VLGPSMARADTVEVSMTALRLVERLIEAGAVAVKGESAGIAHGLDRWRELIGQGVEAQNAGDPLAQQRVGRLAFAKRPLS ARGYLESVGFHLVGLPDVYVPETAGSERQVVAIIDAVADEIGKQGLDRTLKARGASLSFDSTYDVDEFKFNPYGIVKVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26272; Mature: 26140
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRHVLCFLGRDRDLCQLSEAAAKAVRDFATGFSVDEDYSQAEPDDRMNRSFDVCWDRV CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHCC EPDAWNEADEKAVADHQSVLYVLGPSMARADTVEVSMTALRLVERLIEAGAVAVKGESAG CCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC IAHGLDRWRELIGQGVEAQNAGDPLAQQRVGRLAFAKRPLSARGYLESVGFHLVGLPDVY HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCEE VPETAGSERQVVAIIDAVADEIGKQGLDRTLKARGASLSFDSTYDVDEFKFNPYGIVKVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEEC G C >Mature Secondary Structure TPRHVLCFLGRDRDLCQLSEAAAKAVRDFATGFSVDEDYSQAEPDDRMNRSFDVCWDRV CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHCC EPDAWNEADEKAVADHQSVLYVLGPSMARADTVEVSMTALRLVERLIEAGAVAVKGESAG CCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC IAHGLDRWRELIGQGVEAQNAGDPLAQQRVGRLAFAKRPLSARGYLESVGFHLVGLPDVY HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCEE VPETAGSERQVVAIIDAVADEIGKQGLDRTLKARGASLSFDSTYDVDEFKFNPYGIVKVA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEEEEEEC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA