Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361140

Identifier: 86361140

GI number: 86361140

Start: 462800

End: 463801

Strand: Direct

Name: 86361140

Synonym: RHE_PF00410

Alternate gene names: NA

Gene position: 462800-463801 (Clockwise)

Preceding gene: 86361139

Following gene: 86361141

Centisome position: 72.03

GC content: 60.78

Gene sequence:

>1002_bases
ATGAAGAAACTACTCGCATCGACATGTTTGACGTTCGGCCTGCTCGGCGGCGCGTCTTTCGCCAGCGCCGCCGAATGTGG
CAGCATCACCATCGCCAGCATGAACTGGCAGAGCGCCGAAGTTCTCTCCAACCTGGACAAGTTCATCCTGAACGAAGGTT
ACGGCTGCAGCGCCGACATCACCGTCGGCGACACCGTCCCGACGATCACCTCCATGGCCGAGAAGGGTCAGCCTGATATC
GCTCCGGAAGCCTGGATCGATCTGCTGCCGGATGTCGTCAAGAAAGGCACGGAAGAAGGCCGCATCGTGCAGGTCGGCTC
GCCGCTGCCGGATGGCGGCGTACAGGGCTGGTGGATACCGAAATATGTTGCTGACGCCCATCCCGACATCAAGACCATCG
GCGATGCGCTGAAGCATCCAGAACTCTTCCCCGATCCGGAAGACGCGAAGAAGGGCGCCATCGTCAACGGCCCGCAGGGC
TGGGGCGGCACGGTCGTCACCTCGCAGCTCTACAAGGCGTTTGATGCCGAAAAGGCGGGCTTCACCCTCGTCGACACCGG
CTCTGCCGCCGGTCTCGACGGTTCGATCGCCAAGGCCTACGAACGCAAGGAAGGCTGGGTCGGCTATTACTGGGCTCCGA
CCGCGCTGCTCGGCAAATATCAGATGGTCAAGCTCGAAGCCGGCGTGCCGGAAGATGCTGCCGAATGGAAGCGCTGCATC
ACGGTTGCCGACTGCCCCGATCCGAAGCCGGCGGCATGGCCAGTCGATCACGTCGTGACTCTCGTTGCCAAGCCTTTCTC
CGAAAAGGTTGGGCCTGAGGTCATGGACTATCTGAAGAAGCGCTCCTGGAGCAACGACACCGTCAACAAGCTGATGGCCT
GGATGACGGACAATCAGGCGACCGGCGAAGACGGCGCCAAGCACTTCCTGGAAGAAAACAAGGACATTTGGACCAAGTGG
GTCTCGCCTGAGGCAGCCAAGAAGATCGAAGCTGCTCTTTGA

Upstream 100 bases:

>100_bases
AGAAATCGGTGAGTATAGGAGACGCTTCCTGACGACCGTTGAGGGCGGGTACTGCGGCACCCCGCCTAGCCACATCAGCC
GCTAAATAGAGGGAACGAGA

Downstream 100 bases:

>100_bases
GCCAAAATTGCGGTGCGCCAAAAGCGCACCGCTTCTCACGCGCCGACAAAATCAAAAGACTGCCACGGCTGTTTGACGAA
AGGGGAACCGAGATGGAATG

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKKLLASTCLTFGLLGGASFASAAECGSITIASMNWQSAEVLSNLDKFILNEGYGCSADITVGDTVPTITSMAEKGQPDI
APEAWIDLLPDVVKKGTEEGRIVQVGSPLPDGGVQGWWIPKYVADAHPDIKTIGDALKHPELFPDPEDAKKGAIVNGPQG
WGGTVVTSQLYKAFDAEKAGFTLVDTGSAAGLDGSIAKAYERKEGWVGYYWAPTALLGKYQMVKLEAGVPEDAAEWKRCI
TVADCPDPKPAAWPVDHVVTLVAKPFSEKVGPEVMDYLKKRSWSNDTVNKLMAWMTDNQATGEDGAKHFLEENKDIWTKW
VSPEAAKKIEAAL

Sequences:

>Translated_333_residues
MKKLLASTCLTFGLLGGASFASAAECGSITIASMNWQSAEVLSNLDKFILNEGYGCSADITVGDTVPTITSMAEKGQPDI
APEAWIDLLPDVVKKGTEEGRIVQVGSPLPDGGVQGWWIPKYVADAHPDIKTIGDALKHPELFPDPEDAKKGAIVNGPQG
WGGTVVTSQLYKAFDAEKAGFTLVDTGSAAGLDGSIAKAYERKEGWVGYYWAPTALLGKYQMVKLEAGVPEDAAEWKRCI
TVADCPDPKPAAWPVDHVVTLVAKPFSEKVGPEVMDYLKKRSWSNDTVNKLMAWMTDNQATGEDGAKHFLEENKDIWTKW
VSPEAAKKIEAAL
>Mature_333_residues
MKKLLASTCLTFGLLGGASFASAAECGSITIASMNWQSAEVLSNLDKFILNEGYGCSADITVGDTVPTITSMAEKGQPDI
APEAWIDLLPDVVKKGTEEGRIVQVGSPLPDGGVQGWWIPKYVADAHPDIKTIGDALKHPELFPDPEDAKKGAIVNGPQG
WGGTVVTSQLYKAFDAEKAGFTLVDTGSAAGLDGSIAKAYERKEGWVGYYWAPTALLGKYQMVKLEAGVPEDAAEWKRCI
TVADCPDPKPAAWPVDHVVTLVAKPFSEKVGPEVMDYLKKRSWSNDTVNKLMAWMTDNQATGEDGAKHFLEENKDIWTKW
VSPEAAKKIEAAL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35874; Mature: 35874

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLASTCLTFGLLGGASFASAAECGSITIASMNWQSAEVLSNLDKFILNEGYGCSADI
CHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCE
TVGDTVPTITSMAEKGQPDIAPEAWIDLLPDVVKKGTEEGRIVQVGSPLPDGGVQGWWIP
EECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCH
KYVADAHPDIKTIGDALKHPELFPDPEDAKKGAIVNGPQGWGGTVVTSQLYKAFDAEKAG
HHHHCCCCCHHHHHHHHHCCCCCCCCCHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCC
FTLVDTGSAAGLDGSIAKAYERKEGWVGYYWAPTALLGKYQMVKLEAGVPEDAAEWKRCI
EEEEECCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHCCEEEEEEECCCCHHHHHHHHEE
TVADCPDPKPAAWPVDHVVTLVAKPFSEKVGPEVMDYLKKRSWSNDTVNKLMAWMTDNQA
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
TGEDGAKHFLEENKDIWTKWVSPEAAKKIEAAL
CCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MKKLLASTCLTFGLLGGASFASAAECGSITIASMNWQSAEVLSNLDKFILNEGYGCSADI
CHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCE
TVGDTVPTITSMAEKGQPDIAPEAWIDLLPDVVKKGTEEGRIVQVGSPLPDGGVQGWWIP
EECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCH
KYVADAHPDIKTIGDALKHPELFPDPEDAKKGAIVNGPQGWGGTVVTSQLYKAFDAEKAG
HHHHCCCCCHHHHHHHHHCCCCCCCCCHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCC
FTLVDTGSAAGLDGSIAKAYERKEGWVGYYWAPTALLGKYQMVKLEAGVPEDAAEWKRCI
EEEEECCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHCCEEEEEEECCCCHHHHHHHHEE
TVADCPDPKPAAWPVDHVVTLVAKPFSEKVGPEVMDYLKKRSWSNDTVNKLMAWMTDNQA
EEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
TGEDGAKHFLEENKDIWTKWVSPEAAKKIEAAL
CCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA