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The map label for this gene is 86361138

Identifier: 86361138

GI number: 86361138

Start: 461297

End: 461926

Strand: Direct

Name: 86361138

Synonym: RHE_PF00408

Alternate gene names: NA

Gene position: 461297-461926 (Clockwise)

Preceding gene: 86361119

Following gene: 86361139

Centisome position: 71.8

GC content: 57.14

Gene sequence:

>630_bases
ATGGACCAGGCTTTGAACGACACCGGCTGGCGCGGATCGCAGGAGGGTTGGCTGGAAGCAGCCTACCAGTCACTGCTGGA
ATCCGGCGTGGAATCGGTGAAAATTCTGCCGCTCGCAAAGAAGCTCAATCTCTCGCGGACGAGCTTCTACTGGTTCTTCA
AGGATCGGGAGGAACTGTTGAGCGCGCTGGTGGCGCGGTGGCGCGATAAAAACACCGGCAATATCGTCAAGCAGTCCGAA
GCCTATGCGGAGTCGCTGGCCGAGGCGATGCTCAACGTTTTCGATTGCTGGCTGAACACTGATCTCTTCGACGCCAAGTT
CGAATTTGCCGTGCGCAGCTGGGCGCTGCAGTCGGACGAGCTTCTGGCCGAGGTCCACAAGGCCGATCAGATCCGGCTGG
AGGCGCTTAAACGAATGTTTATGCGGTTCGGGGTACCAGAAACGACATCGGATGTCAGAGCGCGGACAACTTATCTCGTT
CAGATCGGCTATATCTCCATGCAGTCTAAGGAGGAACTCGCCATCCGCATGAAACGGATTCCGGAATATATTGCGATCTA
CACCGGCGAAGTGCCGCAGCAGAGGGAGCTCGATCGCTTCTTCGCGCGGCATAGCTATAGGCCCGACTGA

Upstream 100 bases:

>100_bases
TGTACATATGTGTCAACATTGAAAACATGAAGGTCATTGTTATAGACACTAATGTACATTTTTCTTGTGCCAAGCCGCGG
AAGTTGATAGGAGATGATGC

Downstream 100 bases:

>100_bases
GGAAGCCGAGATGAGCGTTTCCTTGAGGATCGGTATCATTGGTGGTGGGGGCTGGCTCGGCGGGGCCATTGCCAGCTCAA
TCCTCGATTCCGGCCTGGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; TetR Family Regulatory Protein

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFYWFFKDREELLSALVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNTDLFDAKFEFAVRSWALQSDELLAEVHKADQIRLEALKRMFMRFGVPETTSDVRARTTYLV
QIGYISMQSKEELAIRMKRIPEYIAIYTGEVPQQRELDRFFARHSYRPD

Sequences:

>Translated_209_residues
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFYWFFKDREELLSALVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNTDLFDAKFEFAVRSWALQSDELLAEVHKADQIRLEALKRMFMRFGVPETTSDVRARTTYLV
QIGYISMQSKEELAIRMKRIPEYIAIYTGEVPQQRELDRFFARHSYRPD
>Mature_209_residues
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFYWFFKDREELLSALVARWRDKNTGNIVKQSE
AYAESLAEAMLNVFDCWLNTDLFDAKFEFAVRSWALQSDELLAEVHKADQIRLEALKRMFMRFGVPETTSDVRARTTYLV
QIGYISMQSKEELAIRMKRIPEYIAIYTGEVPQQRELDRFFARHSYRPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24381; Mature: 24381

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFYWFFKDREELL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCEEEEEECCHHHHH
SALVARWRDKNTGNIVKQSEAYAESLAEAMLNVFDCWLNTDLFDAKFEFAVRSWALQSDE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
LLAEVHKADQIRLEALKRMFMRFGVPETTSDVRARTTYLVQIGYISMQSKEELAIRMKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHC
PEYIAIYTGEVPQQRELDRFFARHSYRPD
CHHEEEECCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDQALNDTGWRGSQEGWLEAAYQSLLESGVESVKILPLAKKLNLSRTSFYWFFKDREELL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCCCCEEEEEECCHHHHH
SALVARWRDKNTGNIVKQSEAYAESLAEAMLNVFDCWLNTDLFDAKFEFAVRSWALQSDE
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
LLAEVHKADQIRLEALKRMFMRFGVPETTSDVRARTTYLVQIGYISMQSKEELAIRMKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEECCCHHHHHHHHHHC
PEYIAIYTGEVPQQRELDRFFARHSYRPD
CHHEEEECCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA