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The map label for this gene is dppCf

Identifier: 86360971

GI number: 86360971

Start: 256938

End: 257873

Strand: Direct

Name: dppCf

Synonym: RHE_PF00241

Alternate gene names: 86360971

Gene position: 256938-257873 (Clockwise)

Preceding gene: 86360970

Following gene: 86360972

Centisome position: 39.99

GC content: 64.21

Gene sequence:

>936_bases
ATGACGATCTCCACCGAAGACGCAGACAGCACCCATGCCAGCGGCTTTCGCAATTGGCTGCACGCGTCCGAGCCACAAGG
CTGGTTCCAATCATCGGCGCAACAGATCCATCAGGGCTGGCATAAGTTCAGCCTCCACCCGCTCGGCCTCGCCGGTCTCG
TCATTATCGTATTGCTGATCGTGGTGGCAACGGCGGCTCCCCTGCTCACGAGCTACGATCCGATCGTTCAGGACATGGCG
GGGCGGCTTGCGCCGCCCTCTGCGGAGCATTGGCTCGGCACCGACAATTTCGGCCGCGACGTCTTTTCTAGGGTGATCTA
CGGCGCCCGTACGACGCTCTACATCATCATGCTGGTGACGATCATCGTCGCTCCGCTCGGCCTGCTGATCGGCACCTTCT
CGGGTTATTTCGGTGGCATCGTCGACGAGATCCTGATGCGCATCACCGATATTTTCCTCTCCTTCCCGGGCCTCGTGCTG
GCGCTCGGTTTTGCCGCCGCTCTCGGCCCCGGCATCACCAATGCGATCATCGCCATTTCGCTGACGGCCTGGCCGCCGAT
CGCGCGCCTCGCACGCGCCGAAACGCTCAGCCTGCGCAAGGCGGATTATATCGCCGCCGTGCGCCTGCAGGGCGCGACCT
CGCTCGCAATCATTACCCGCCAGATCCTGCCGATGTGCATTCCCTCGGTGATCGTGCGCGTCACCCTCAACATGGCCGGC
ATCATCATCACCGCCGCCGGTCTCGGCTTTCTCGGCCTCGGCGCGCAACCGCCATGGCCGGAGTGGGGTTCGATGGCCGC
CAGCGGCCGCGAATTCATGCTCGACAGCCCCTGGGTGATCGCCGCGCCCGGCATCGCCATCGCGCTCGTCAGCCTCGCCT
TCAATCTCGTCGGCGATGCGCTGCGCGACGTACTCGACCCGAGAGGTTCGGAATGA

Upstream 100 bases:

>100_bases
GTCATGGGGTCGGTACTGACGATCGGCGCCGTCTTCCTGACGATCAACATCCTGTCCGACGTCCTCTATCGCATCCTTGA
TCCGAGAACACGGTAACGCC

Downstream 100 bases:

>100_bases
CAGAGCCCCTGATCGATATCCGCAACCTCGAAATCGCCTACGGCGGCGGCCACATGCGCGCCGTGCGCGGCGTCAGTTTT
GCGCTCGGCCAGGAAAAGCT

Product: dipeptide ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLIVVATAAPLLTSYDPIVQDMA
GRLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTIIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVL
ALGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAG
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE

Sequences:

>Translated_311_residues
MTISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLIVVATAAPLLTSYDPIVQDMA
GRLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTIIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVL
ALGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAG
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE
>Mature_310_residues
TISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLIVVATAAPLLTSYDPIVQDMAG
RLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVTIIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVLA
LGFAAALGPGITNAIIAISLTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAGI
IITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDALRDVLDPRGSE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=45.4198473282443, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1787054, Length=273, Percent_Identity=42.1245421245421, Blast_Score=217, Evalue=6e-58,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=42.1940928270042, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1789964, Length=279, Percent_Identity=42.6523297491039, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=32.962962962963, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1787549, Length=273, Percent_Identity=32.967032967033, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=29.7777777777778, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33087; Mature: 32956

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLI
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVATAAPLLTSYDPIVQDMAGRLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVT
HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVLALGFAAALGPGITNAIIAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEE
LTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAG
ECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDA
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHH
LRDVLDPRGSE
HHHHHCCCCCC
>Mature Secondary Structure 
TISTEDADSTHASGFRNWLHASEPQGWFQSSAQQIHQGWHKFSLHPLGLAGLVIIVLLI
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVATAAPLLTSYDPIVQDMAGRLAPPSAEHWLGTDNFGRDVFSRVIYGARTTLYIIMLVT
HHHHHHHHHHCCHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IIVAPLGLLIGTFSGYFGGIVDEILMRITDIFLSFPGLVLALGFAAALGPGITNAIIAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEE
LTAWPPIARLARAETLSLRKADYIAAVRLQGATSLAIITRQILPMCIPSVIVRVTLNMAG
ECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIITAAGLGFLGLGAQPPWPEWGSMAASGREFMLDSPWVIAAPGIAIALVSLAFNLVGDA
HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEECCCCCEEECCHHHHHHHHHHHHHHHHH
LRDVLDPRGSE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]