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The map label for this gene is dppBf

Identifier: 86360970

GI number: 86360970

Start: 255854

End: 256933

Strand: Direct

Name: dppBf

Synonym: RHE_PF00240

Alternate gene names: 86360970

Gene position: 255854-256933 (Clockwise)

Preceding gene: 86360969

Following gene: 86360971

Centisome position: 39.82

GC content: 62.96

Gene sequence:

>1080_bases
GTGGCGAGCGCCGATCTGACATCGAAGCCGGATGGGAGCGGGTTCGCCGAGGCGGCTCCGCACCCTCTGCTGAGCCTGCT
GCGGCGGCTGGCGGGACGCGCGGTGGCCGTCGTGACGACGCTGCTCGGCCTGCTCTTCCTGACCTTCTCGATGGGCCGCC
TGCTGCCTGCCGACCCGGTGCTCGCGATCACCGGGGCGGAGGTCAGTAAGGAGGTTTACGACCGCGTCTATAACGAGCTC
GGCCTTGGGCAGCCGATCTGGATGCAGTTCCTCTCCTATGTCGGGAAGATCGCCACCGGTGATCTCGGCATGGCGGCGAC
GACCGGCCAGCCGATCCTGACCGATCTGATGACGATCTTTCCGGCGACCATCGAGCTTGCCATCGTTGCGATGATCATTG
GAGCGATCGTCGGCATTCCCTTGGGCATCACCGCTGCGGTCCGGCGCGGGACGATGATCGACCATATCGCCCGGATCGTC
GCGCTTGCCGGCCATTCCATCCCGATCTTCTGGACCGGCCTGATGGCGCTCTTCCTCTTCTACGCCAAGCTGAAGCTCGT
CGGCGCATCGGGCCGGGTCGACGTCTTTTACGAGGGCTTAGTCACACCTATGACCGGTTTTCTGCTGATCGATGCGGCGA
TCCAGGGCCAATGGGACGTGTTTCAGAACGCGCTCGGCCACATCATCCTGCCGGCGGCAATCCTCGGCTATTACTCCGTT
GCCTATATCAGCCGCATGTCGCGAAGCTTCATGCTGGAGCAGCTGAGCCAGGAATATATCATCACCGCGCGAGCAAAGGG
GCTTGGCACCCGCAAGGTCGTCTGGCGCCATGCCTTCCGCAATATTCGCGTGCAGCTCCTGACGATCCTGGCGCTGACCT
TCGGCGGGCTGCTCGAAGGCGCGGTGTTGATCGAGACGGTTTTCGGCTGGCCGGGCCTCGGTCAGTACCTCACCCGCGGG
CTGCAGATGAACGACATGAACGTCGTCATGGGGTCGGTACTGACGATCGGCGCCGTCTTCCTGACGATCAACATCCTGTC
CGACGTCCTCTATCGCATCCTTGATCCGAGAACACGGTAA

Upstream 100 bases:

>100_bases
AGCGAACCGACCCCTATGTCATGCGCGCCAACGTGAAGGGCTATCACGGGCACACGACCTGGTCGACGCGCTGGCATGAT
GTGACCAAGGAGTAGAGCGC

Downstream 100 bases:

>100_bases
CGCCATGACGATCTCCACCGAAGACGCAGACAGCACCCATGCCAGCGGCTTTCGCAATTGGCTGCACGCGTCCGAGCCAC
AAGGCTGGTTCCAATCATCG

Product: dipeptide ABC transporter, permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MASADLTSKPDGSGFAEAAPHPLLSLLRRLAGRAVAVVTTLLGLLFLTFSMGRLLPADPVLAITGAEVSKEVYDRVYNEL
GLGQPIWMQFLSYVGKIATGDLGMAATTGQPILTDLMTIFPATIELAIVAMIIGAIVGIPLGITAAVRRGTMIDHIARIV
ALAGHSIPIFWTGLMALFLFYAKLKLVGASGRVDVFYEGLVTPMTGFLLIDAAIQGQWDVFQNALGHIILPAAILGYYSV
AYISRMSRSFMLEQLSQEYIITARAKGLGTRKVVWRHAFRNIRVQLLTILALTFGGLLEGAVLIETVFGWPGLGQYLTRG
LQMNDMNVVMGSVLTIGAVFLTINILSDVLYRILDPRTR

Sequences:

>Translated_359_residues
MASADLTSKPDGSGFAEAAPHPLLSLLRRLAGRAVAVVTTLLGLLFLTFSMGRLLPADPVLAITGAEVSKEVYDRVYNEL
GLGQPIWMQFLSYVGKIATGDLGMAATTGQPILTDLMTIFPATIELAIVAMIIGAIVGIPLGITAAVRRGTMIDHIARIV
ALAGHSIPIFWTGLMALFLFYAKLKLVGASGRVDVFYEGLVTPMTGFLLIDAAIQGQWDVFQNALGHIILPAAILGYYSV
AYISRMSRSFMLEQLSQEYIITARAKGLGTRKVVWRHAFRNIRVQLLTILALTFGGLLEGAVLIETVFGWPGLGQYLTRG
LQMNDMNVVMGSVLTIGAVFLTINILSDVLYRILDPRTR
>Mature_358_residues
ASADLTSKPDGSGFAEAAPHPLLSLLRRLAGRAVAVVTTLLGLLFLTFSMGRLLPADPVLAITGAEVSKEVYDRVYNELG
LGQPIWMQFLSYVGKIATGDLGMAATTGQPILTDLMTIFPATIELAIVAMIIGAIVGIPLGITAAVRRGTMIDHIARIVA
LAGHSIPIFWTGLMALFLFYAKLKLVGASGRVDVFYEGLVTPMTGFLLIDAAIQGQWDVFQNALGHIILPAAILGYYSVA
YISRMSRSFMLEQLSQEYIITARAKGLGTRKVVWRHAFRNIRVQLLTILALTFGGLLEGAVLIETVFGWPGLGQYLTRGL
QMNDMNVVMGSVLTIGAVFLTINILSDVLYRILDPRTR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=43.1547619047619, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=41.1411411411411, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1787053, Length=334, Percent_Identity=30.5389221556886, Blast_Score=174, Evalue=9e-45,
Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=32.8519855595668, Blast_Score=161, Evalue=6e-41,
Organism=Escherichia coli, GI1789888, Length=337, Percent_Identity=29.080118694362, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787497, Length=336, Percent_Identity=28.8690476190476, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788504, Length=296, Percent_Identity=26.3513513513513, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38841; Mature: 38710

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASADLTSKPDGSGFAEAAPHPLLSLLRRLAGRAVAVVTTLLGLLFLTFSMGRLLPADPV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
LAITGAEVSKEVYDRVYNELGLGQPIWMQFLSYVGKIATGDLGMAATTGQPILTDLMTIF
EEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PATIELAIVAMIIGAIVGIPLGITAAVRRGTMIDHIARIVALAGHSIPIFWTGLMALFLF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YAKLKLVGASGRVDVFYEGLVTPMTGFLLIDAAIQGQWDVFQNALGHIILPAAILGYYSV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AYISRMSRSFMLEQLSQEYIITARAKGLGTRKVVWRHAFRNIRVQLLTILALTFGGLLEG
HHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLIETVFGWPGLGQYLTRGLQMNDMNVVMGSVLTIGAVFLTINILSDVLYRILDPRTR
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASADLTSKPDGSGFAEAAPHPLLSLLRRLAGRAVAVVTTLLGLLFLTFSMGRLLPADPV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
LAITGAEVSKEVYDRVYNELGLGQPIWMQFLSYVGKIATGDLGMAATTGQPILTDLMTIF
EEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PATIELAIVAMIIGAIVGIPLGITAAVRRGTMIDHIARIVALAGHSIPIFWTGLMALFLF
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
YAKLKLVGASGRVDVFYEGLVTPMTGFLLIDAAIQGQWDVFQNALGHIILPAAILGYYSV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AYISRMSRSFMLEQLSQEYIITARAKGLGTRKVVWRHAFRNIRVQLLTILALTFGGLLEG
HHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLIETVFGWPGLGQYLTRGLQMNDMNVVMGSVLTIGAVFLTINILSDVLYRILDPRTR
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]