Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360908

Identifier: 86360908

GI number: 86360908

Start: 186910

End: 187224

Strand: Direct

Name: 86360908

Synonym: RHE_PF00177

Alternate gene names: NA

Gene position: 186910-187224 (Clockwise)

Preceding gene: 86360907

Following gene: 86360909

Centisome position: 29.09

GC content: 55.24

Gene sequence:

>315_bases
ATGGATGGCTCCCTCCGCCCGAAGGCCCGTCCGAACCAAACCCTCGTCGCTCAAGAGGAACAGACATTGCTTTTGCTGGA
ACGCAAACCCGAGATGCCGATGGAGATGGACGAACCGAACATCGTCACAACCTGGGAAAACCGCACGCAAATCATCGAGA
TCATGCATAGCGCGCGCGAGATGAGCCAAGAATTCCAGGATCTCTGGGATAAAAGCGGCGGAATGGGCCGACTCAGCCAG
GACGATACGGATAAGCTGATCGAGCTTCTGCGTGAAATCGGCGACCTGAATGAAATGCTGAAACGCCTGGCATAG

Upstream 100 bases:

>100_bases
GCTTGCCGATTGGCTAACGGGTACCGCCCCACACCCGCTAGCCAATCGTTGATCTCCCATTGCCCGACCGTCAAACACCG
CGTTCCCGAGTAACCTCACC

Downstream 100 bases:

>100_bases
CAGACGGGCCGGTAAGGGACGTCAGAGGTCCCATGGAGAAATCAGGCGATCGACACGGTCGACAGGGCCAATTCAGAATC
ATGACTGACAAGCCAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ
DDTDKLIELLREIGDLNEMLKRLA

Sequences:

>Translated_104_residues
MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ
DDTDKLIELLREIGDLNEMLKRLA
>Mature_104_residues
MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ
DDTDKLIELLREIGDLNEMLKRLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12126; Mature: 12126

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSARE
CCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
MSQEFQDLWDKSGGMGRLSQDDTDKLIELLREIGDLNEMLKRLA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSARE
CCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
MSQEFQDLWDKSGGMGRLSQDDTDKLIELLREIGDLNEMLKRLA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA