| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360908
Identifier: 86360908
GI number: 86360908
Start: 186910
End: 187224
Strand: Direct
Name: 86360908
Synonym: RHE_PF00177
Alternate gene names: NA
Gene position: 186910-187224 (Clockwise)
Preceding gene: 86360907
Following gene: 86360909
Centisome position: 29.09
GC content: 55.24
Gene sequence:
>315_bases ATGGATGGCTCCCTCCGCCCGAAGGCCCGTCCGAACCAAACCCTCGTCGCTCAAGAGGAACAGACATTGCTTTTGCTGGA ACGCAAACCCGAGATGCCGATGGAGATGGACGAACCGAACATCGTCACAACCTGGGAAAACCGCACGCAAATCATCGAGA TCATGCATAGCGCGCGCGAGATGAGCCAAGAATTCCAGGATCTCTGGGATAAAAGCGGCGGAATGGGCCGACTCAGCCAG GACGATACGGATAAGCTGATCGAGCTTCTGCGTGAAATCGGCGACCTGAATGAAATGCTGAAACGCCTGGCATAG
Upstream 100 bases:
>100_bases GCTTGCCGATTGGCTAACGGGTACCGCCCCACACCCGCTAGCCAATCGTTGATCTCCCATTGCCCGACCGTCAAACACCG CGTTCCCGAGTAACCTCACC
Downstream 100 bases:
>100_bases CAGACGGGCCGGTAAGGGACGTCAGAGGTCCCATGGAGAAATCAGGCGATCGACACGGTCGACAGGGCCAATTCAGAATC ATGACTGACAAGCCAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ DDTDKLIELLREIGDLNEMLKRLA
Sequences:
>Translated_104_residues MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ DDTDKLIELLREIGDLNEMLKRLA >Mature_104_residues MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSAREMSQEFQDLWDKSGGMGRLSQ DDTDKLIELLREIGDLNEMLKRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12126; Mature: 12126
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSARE CCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH MSQEFQDLWDKSGGMGRLSQDDTDKLIELLREIGDLNEMLKRLA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDGSLRPKARPNQTLVAQEEQTLLLLERKPEMPMEMDEPNIVTTWENRTQIIEIMHSARE CCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH MSQEFQDLWDKSGGMGRLSQDDTDKLIELLREIGDLNEMLKRLA HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA