| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86360907
Identifier: 86360907
GI number: 86360907
Start: 185626
End: 186726
Strand: Direct
Name: 86360907
Synonym: RHE_PF00176
Alternate gene names: NA
Gene position: 185626-186726 (Clockwise)
Preceding gene: 86360906
Following gene: 86360908
Centisome position: 28.89
GC content: 63.94
Gene sequence:
>1101_bases ATGAGCCCCTCGATGATCTCGAGAAGACAGTTTCTGCTGGCTGGCATAGCGCTTCAGATCTTGAAGCCGGGATTTGCCGC CGCGCAGTCGACCAACACCTACGACCATGGGATCGGCGGGTCCGGCACCTCGATCCACCAGGGCGGCGGCGAGAATGAAG ACCACGGCATCGGCGGAACCGGTATCGTCGGGACCATCCAGGGTTTTGGCAGCATCATCGTCAACGGCATCCACATACCG TTCAGCGCGACCACGCCGATCGAGATCGAGGGACGGCATGTTCCTGCAAGCGCGATGAAGGTCGGTCATGTCGTCCGTGT GCTGCTGAAGGGAAAGCGTGCCGCCCGCATCACCATCGTCAGCGAAGTCCAGGGCCGCATCGACCGGTTGAGCAAGGCTT CGATAACCATCCTTTCGCAAACCGTCGACATATCCGGTCTGGCGACGAAGGGCCTGCGGAAAGGCAAGCGGGTCGCCGTC TTCGGCATCCGCAAACCAGACGGCACGATCGTTGCCCGGCGTATCGAAACCCGCTCCGTCTCGGATGGCGCCCATGTCCG CGGGATCCCCGTCAAGAGCGGCAATCGCGTCCTGATCGGCGGCCTTTCGCTCGGAGGCACGCACCGCCAATTGGTCGGCA AGCAAACCGTCGTTTATCTCAAGACGGCGGCTGATCGGTTGGCGATCACCCGCATTCAGCCCGAACCGGTAGTGCCGGGC CTCAAACGCGGTACCGTCAATATCGAAACCTTCCGGGCGAGCGACAAGGACGGACCGAGGTCAGGCCCCGTGGGTTCGCC GCCTTTCGGATCGATGCGGCTATCTCAGGATGGTCACGGCTTCGTTGATATCGGCGTGCGGGATTCGAACAAACTGACCG GTTTTCCAAACCCGCATCCTCCCGGCGGCATCGATTCCCGGCCGCCGCGCGGCTTCTGGGGCGATCCGCCGCATGATCAC CCACCCTTTGGCAGAGCCGGTCCTGACGGCTTTTCCGGCCCGGGCGGACCAGGACCGGGACCGGGACCGGAACCGGGACC GAACGGTCCGCCGCCGGGACCGCCACCGGGACCGCCACCGGATTTTCCAGGACAGCCCTGA
Upstream 100 bases:
>100_bases CCGGCGGCAACAGCCGCTGGATCGCAGGGCTCTATGTCATGACCGAAGAGGGTGAGACGGGTCTCCAGGCAGACGCCGCT TCCAAGACGGAGGCGGACGA
Downstream 100 bases:
>100_bases CGGCGCGACTGAGCATTTGACAAATGGGAAATTTTCCCATTTATTGTCTTTGCGAGCTCTCGTTCGGGTGATTCCGAAAT AGGGCTTGCCGATTGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSPSMISRRQFLLAGIALQILKPGFAAAQSTNTYDHGIGGSGTSIHQGGGENEDHGIGGTGIVGTIQGFGSIIVNGIHIP FSATTPIEIEGRHVPASAMKVGHVVRVLLKGKRAARITIVSEVQGRIDRLSKASITILSQTVDISGLATKGLRKGKRVAV FGIRKPDGTIVARRIETRSVSDGAHVRGIPVKSGNRVLIGGLSLGGTHRQLVGKQTVVYLKTAADRLAITRIQPEPVVPG LKRGTVNIETFRASDKDGPRSGPVGSPPFGSMRLSQDGHGFVDIGVRDSNKLTGFPNPHPPGGIDSRPPRGFWGDPPHDH PPFGRAGPDGFSGPGGPGPGPGPEPGPNGPPPGPPPGPPPDFPGQP
Sequences:
>Translated_366_residues MSPSMISRRQFLLAGIALQILKPGFAAAQSTNTYDHGIGGSGTSIHQGGGENEDHGIGGTGIVGTIQGFGSIIVNGIHIP FSATTPIEIEGRHVPASAMKVGHVVRVLLKGKRAARITIVSEVQGRIDRLSKASITILSQTVDISGLATKGLRKGKRVAV FGIRKPDGTIVARRIETRSVSDGAHVRGIPVKSGNRVLIGGLSLGGTHRQLVGKQTVVYLKTAADRLAITRIQPEPVVPG LKRGTVNIETFRASDKDGPRSGPVGSPPFGSMRLSQDGHGFVDIGVRDSNKLTGFPNPHPPGGIDSRPPRGFWGDPPHDH PPFGRAGPDGFSGPGGPGPGPGPEPGPNGPPPGPPPGPPPDFPGQP >Mature_365_residues SPSMISRRQFLLAGIALQILKPGFAAAQSTNTYDHGIGGSGTSIHQGGGENEDHGIGGTGIVGTIQGFGSIIVNGIHIPF SATTPIEIEGRHVPASAMKVGHVVRVLLKGKRAARITIVSEVQGRIDRLSKASITILSQTVDISGLATKGLRKGKRVAVF GIRKPDGTIVARRIETRSVSDGAHVRGIPVKSGNRVLIGGLSLGGTHRQLVGKQTVVYLKTAADRLAITRIQPEPVVPGL KRGTVNIETFRASDKDGPRSGPVGSPPFGSMRLSQDGHGFVDIGVRDSNKLTGFPNPHPPGGIDSRPPRGFWGDPPHDHP PFGRAGPDGFSGPGGPGPGPGPEPGPNGPPPGPPPGPPPDFPGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37867; Mature: 37736
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSMISRRQFLLAGIALQILKPGFAAAQSTNTYDHGIGGSGTSIHQGGGENEDHGIGGT CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC GIVGTIQGFGSIIVNGIHIPFSATTPIEIEGRHVPASAMKVGHVVRVLLKGKRAARITIV CCEEHHHHHCEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEH SEVQGRIDRLSKASITILSQTVDISGLATKGLRKGKRVAVFGIRKPDGTIVARRIETRSV HHHHHHHHHHHHCEEEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCC SDGAHVRGIPVKSGNRVLIGGLSLGGTHRQLVGKQTVVYLKTAADRLAITRIQPEPVVPG CCCCEEEEEEECCCCEEEEEEECCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCC LKRGTVNIETFRASDKDGPRSGPVGSPPFGSMRLSQDGHGFVDIGVRDSNKLTGFPNPHP CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC PGGIDSRPPRGFWGDPPHDHPPFGRAGPDGFSGPGGPGPGPGPEPGPNGPPPGPPPGPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFPGQP CCCCCC >Mature Secondary Structure SPSMISRRQFLLAGIALQILKPGFAAAQSTNTYDHGIGGSGTSIHQGGGENEDHGIGGT CCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC GIVGTIQGFGSIIVNGIHIPFSATTPIEIEGRHVPASAMKVGHVVRVLLKGKRAARITIV CCEEHHHHHCEEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEH SEVQGRIDRLSKASITILSQTVDISGLATKGLRKGKRVAVFGIRKPDGTIVARRIETRSV HHHHHHHHHHHHCEEEEEEEEECCCHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCC SDGAHVRGIPVKSGNRVLIGGLSLGGTHRQLVGKQTVVYLKTAADRLAITRIQPEPVVPG CCCCEEEEEEECCCCEEEEEEECCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCCCCC LKRGTVNIETFRASDKDGPRSGPVGSPPFGSMRLSQDGHGFVDIGVRDSNKLTGFPNPHP CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC PGGIDSRPPRGFWGDPPHDHPPFGRAGPDGFSGPGGPGPGPGPEPGPNGPPPGPPPGPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFPGQP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA