Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360848

Identifier: 86360848

GI number: 86360848

Start: 122617

End: 123735

Strand: Direct

Name: 86360848

Synonym: RHE_PF00115

Alternate gene names: NA

Gene position: 122617-123735 (Clockwise)

Preceding gene: 86360847

Following gene: 86360849

Centisome position: 19.08

GC content: 55.5

Gene sequence:

>1119_bases
ATGATGTGCATTACATTAAAACACATGGAACAGTTTGACGATTATAGGCGGCAGAATTCGAAGTCCCTCGAGGAGACGAC
TTCCGACAAGCTCGTCCATTGGATCCGTACAGTGAAGTGGTGGCGATCGCGATCGCGTTGGCAAGACACCCATTCCAGCG
TGTCAGTTCTGCTCCGGGCCATCACCAGCGAGGCCGATCTCGTCGAGCAATGGCGAAATACGCTCGTCGGTGAAATCTCT
AGCTGGGGTGGGCAAAGTCTAAAGGATGTTTCGCAGAGCAACTTCTGGCGGTCCTACGCGTGTTTCGACAAGCACATTGA
GAAGGTTTTGGCTTCTGCGCCGAGCTCTTTCACCACCGCAGATCTGAGCGACTATGAGGCGGGATCGTTCGATTTCTCGA
CCCGAATTCGCGCGATCGAGCCGGATATTGCGCCCAACCTGTTCATCATTGATGGACAGCAGAGGATGTCCGCAATCAAC
GTGGATCATATCTTTGATCCAAAGTTGGTCCGGACGCTGTCGCTGCGCGCAATCCGTGCTTTGACGAAACGCGCCGCCGA
TCAGATCGCAAGTGCTGAGACCACGTCCGTTACTTCGCTCCTTCAGCTGACGCGAGAGGTTCTGTCACTCGAAGTTCAGC
AACGCGTGCGATGGCGCATCGTTTTCAAGAAGACACCGCCCTCCGCTCCGGCCCCGGAGATGGTTCGGGAGCACGTCCTT
GGCTTTGAACTGCGTACTGGCAATCCTCCTCCCTTCGACTCCGACGAACGACGCAAGGGCGCCGTCGCGGTGCCTGCTGT
TTTCATTCAGGCATCGAAGGTGAAGCATGAACAGGTTTGCAAGCGAAACAGTCGCAGATATTTACCAGTGGCGGTTCGCG
AAGGGTGTCGAACAGCATCTTTCCGTCGCCGCGCACAAACTCCTCCATCCTCTTGTGGCTGCATGCAGCCTGCAGGACGT
CGACGTCTATGGTCCAATCTACAATTGGCCGAAACTGCCCGGTCGACTCGGCATCTGGGTCGAAGGCAAGTGGTATCTGA
CCTTCGAGTGGATCGAAGGGCAGGGAGCTTTCGAAATACAGCTCGAGCGACGATGAAACTTCAAAAGGGGGGTCGATGA

Upstream 100 bases:

>100_bases
AATTGTCGCGCTTGTTTGTGCACTAGGCGCGAACGTGCTCCGGGCATTGCGCCATCTTCAGATTTCTTAGTCACGTACGG
GACGGGAGTTGACCTATGTA

Downstream 100 bases:

>100_bases
CATCTCAAACCAACATGATCCCGGCTCCCCCGATTTCTCCTGGCGATGTGCTTCGCGACAAGTTTCTGGTCAATCTAACG
CAAGATCAATTGGCGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MMCITLKHMEQFDDYRRQNSKSLEETTSDKLVHWIRTVKWWRSRSRWQDTHSSVSVLLRAITSEADLVEQWRNTLVGEIS
SWGGQSLKDVSQSNFWRSYACFDKHIEKVLASAPSSFTTADLSDYEAGSFDFSTRIRAIEPDIAPNLFIIDGQQRMSAIN
VDHIFDPKLVRTLSLRAIRALTKRAADQIASAETTSVTSLLQLTREVLSLEVQQRVRWRIVFKKTPPSAPAPEMVREHVL
GFELRTGNPPPFDSDERRKGAVAVPAVFIQASKVKHEQVCKRNSRRYLPVAVREGCRTASFRRRAQTPPSSCGCMQPAGR
RRLWSNLQLAETARSTRHLGRRQVVSDLRVDRRAGSFRNTARATMKLQKGGR

Sequences:

>Translated_372_residues
MMCITLKHMEQFDDYRRQNSKSLEETTSDKLVHWIRTVKWWRSRSRWQDTHSSVSVLLRAITSEADLVEQWRNTLVGEIS
SWGGQSLKDVSQSNFWRSYACFDKHIEKVLASAPSSFTTADLSDYEAGSFDFSTRIRAIEPDIAPNLFIIDGQQRMSAIN
VDHIFDPKLVRTLSLRAIRALTKRAADQIASAETTSVTSLLQLTREVLSLEVQQRVRWRIVFKKTPPSAPAPEMVREHVL
GFELRTGNPPPFDSDERRKGAVAVPAVFIQASKVKHEQVCKRNSRRYLPVAVREGCRTASFRRRAQTPPSSCGCMQPAGR
RRLWSNLQLAETARSTRHLGRRQVVSDLRVDRRAGSFRNTARATMKLQKGGR
>Mature_372_residues
MMCITLKHMEQFDDYRRQNSKSLEETTSDKLVHWIRTVKWWRSRSRWQDTHSSVSVLLRAITSEADLVEQWRNTLVGEIS
SWGGQSLKDVSQSNFWRSYACFDKHIEKVLASAPSSFTTADLSDYEAGSFDFSTRIRAIEPDIAPNLFIIDGQQRMSAIN
VDHIFDPKLVRTLSLRAIRALTKRAADQIASAETTSVTSLLQLTREVLSLEVQQRVRWRIVFKKTPPSAPAPEMVREHVL
GFELRTGNPPPFDSDERRKGAVAVPAVFIQASKVKHEQVCKRNSRRYLPVAVREGCRTASFRRRAQTPPSSCGCMQPAGR
RRLWSNLQLAETARSTRHLGRRQVVSDLRVDRRAGSFRNTARATMKLQKGGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42468; Mature: 42468

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCITLKHMEQFDDYRRQNSKSLEETTSDKLVHWIRTVKWWRSRSRWQDTHSSVSVLLRA
CEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSEADLVEQWRNTLVGEISSWGGQSLKDVSQSNFWRSYACFDKHIEKVLASAPSSFTTA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLSDYEAGSFDFSTRIRAIEPDIAPNLFIIDGQQRMSAINVDHIFDPKLVRTLSLRAIRA
CCCCCCCCCCCHHHCEEEECCCCCCCEEEEECHHHHHHCCCHHCCCHHHHHHHHHHHHHH
LTKRAADQIASAETTSVTSLLQLTREVLSLEVQQRVRWRIVFKKTPPSAPAPEMVREHVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHH
GFELRTGNPPPFDSDERRKGAVAVPAVFIQASKVKHEQVCKRNSRRYLPVAVREGCRTAS
CEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH
FRRRAQTPPSSCGCMQPAGRRRLWSNLQLAETARSTRHLGRRQVVSDLRVDRRAGSFRNT
HHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARATMKLQKGGR
HHHHHHHHCCCC
>Mature Secondary Structure
MMCITLKHMEQFDDYRRQNSKSLEETTSDKLVHWIRTVKWWRSRSRWQDTHSSVSVLLRA
CEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITSEADLVEQWRNTLVGEISSWGGQSLKDVSQSNFWRSYACFDKHIEKVLASAPSSFTTA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DLSDYEAGSFDFSTRIRAIEPDIAPNLFIIDGQQRMSAINVDHIFDPKLVRTLSLRAIRA
CCCCCCCCCCCHHHCEEEECCCCCCCEEEEECHHHHHHCCCHHCCCHHHHHHHHHHHHHH
LTKRAADQIASAETTSVTSLLQLTREVLSLEVQQRVRWRIVFKKTPPSAPAPEMVREHVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHH
GFELRTGNPPPFDSDERRKGAVAVPAVFIQASKVKHEQVCKRNSRRYLPVAVREGCRTAS
CEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHH
FRRRAQTPPSSCGCMQPAGRRRLWSNLQLAETARSTRHLGRRQVVSDLRVDRRAGSFRNT
HHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARATMKLQKGGR
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA