Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360847

Identifier: 86360847

GI number: 86360847

Start: 122149

End: 122586

Strand: Direct

Name: 86360847

Synonym: RHE_PF00114

Alternate gene names: NA

Gene position: 122149-122586 (Clockwise)

Preceding gene: 86360844

Following gene: 86360848

Centisome position: 19.01

GC content: 51.37

Gene sequence:

>438_bases
ATGGTCGCGATTGTTTTTGATGTCGGCAATCACCGCGCCACAGTGGATGCACCACGCCTTCAGCCGATCGTCAGTGAAAT
CCTCAATTTCTCGCACCCACCGAATCCTTCGCTAGTGTCTATCTTCACGGTGGGCGATCACCTGAACGAAGGCAAGGAAT
CTCCTCGTAACCTTCGAAAGCTGCTAATCCGCTTCCGGCGCAAAATCAGTTACTCCATCAAGGTTGAGCCGACTATGCTA
TTGATCAATTTGCGGCGAGGGACTTTTGTAAATAACAAGGCCGCAGGTTCAAATCCCTTCAAGGCGGTGGATGAGCTCGC
GACAAACTTATTACTTTTTCGGATTCGATGGGCTGCGTTGGCGGCGAAAATTGTCGCGCTTGTTTGTGCACTAGGCGCGA
ACGTGCTCCGGGCATTGCGCCATCTTCAGATTTCTTAG

Upstream 100 bases:

>100_bases
CGATAACTTGCGGCAGATAGTCCATTTCCTCCCCCGCGCCGCTGTCATAGTCGGCGCCCCGTTTTCGAAGTGTCTTCGTC
AGGAGCGACTTGGTCGGAAC

Downstream 100 bases:

>100_bases
TCACGTACGGGACGGGAGTTGACCTATGTAATGATGTGCATTACATTAAAACACATGGAACAGTTTGACGATTATAGGCG
GCAGAATTCGAAGTCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MVAIVFDVGNHRATVDAPRLQPIVSEILNFSHPPNPSLVSIFTVGDHLNEGKESPRNLRKLLIRFRRKISYSIKVEPTML
LINLRRGTFVNNKAAGSNPFKAVDELATNLLLFRIRWAALAAKIVALVCALGANVLRALRHLQIS

Sequences:

>Translated_145_residues
MVAIVFDVGNHRATVDAPRLQPIVSEILNFSHPPNPSLVSIFTVGDHLNEGKESPRNLRKLLIRFRRKISYSIKVEPTML
LINLRRGTFVNNKAAGSNPFKAVDELATNLLLFRIRWAALAAKIVALVCALGANVLRALRHLQIS
>Mature_145_residues
MVAIVFDVGNHRATVDAPRLQPIVSEILNFSHPPNPSLVSIFTVGDHLNEGKESPRNLRKLLIRFRRKISYSIKVEPTML
LINLRRGTFVNNKAAGSNPFKAVDELATNLLLFRIRWAALAAKIVALVCALGANVLRALRHLQIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16128; Mature: 16128

Theoretical pI: Translated: 11.71; Mature: 11.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIVFDVGNHRATVDAPRLQPIVSEILNFSHPPNPSLVSIFTVGDHLNEGKESPRNLRK
CEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHCCCCCCHHHHHH
LLIRFRRKISYSIKVEPTMLLINLRRGTFVNNKAAGSNPFKAVDELATNLLLFRIRWAAL
HHHHHHHHCCEEEEECCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAKIVALVCALGANVLRALRHLQIS
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAIVFDVGNHRATVDAPRLQPIVSEILNFSHPPNPSLVSIFTVGDHLNEGKESPRNLRK
CEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHCCCCCCHHHHHH
LLIRFRRKISYSIKVEPTMLLINLRRGTFVNNKAAGSNPFKAVDELATNLLLFRIRWAAL
HHHHHHHHCCEEEEECCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAKIVALVCALGANVLRALRHLQIS
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA