Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360844

Identifier: 86360844

GI number: 86360844

Start: 120036

End: 120545

Strand: Direct

Name: 86360844

Synonym: RHE_PF00111

Alternate gene names: NA

Gene position: 120036-120545 (Clockwise)

Preceding gene: 162329649

Following gene: 86360847

Centisome position: 18.68

GC content: 59.02

Gene sequence:

>510_bases
ATGAGCCAACCCCCGCCAGCTCTGTCTGCAGATCCATCGGATGATTTTGCTAGCCTGAGCGACATTGCGCTGCTTCGACT
GCGCGGCAGGGTCGCGGCCGAACTTAAGCGGCGCGGGCTGGCCTCGAACGTCGGGCAGGTCGCGGAAAGCCTTGCTATCG
CCCTATACAATGGCACTCCCGGTCGTCCTAATCTACAGCCTGCGCCGACAGGAACGCAGAATGTCGATGCTCTTTCCCGG
CGCGGGGACCGCTATTCGATTAAGGGTGTACTTGATGCGCGCAAGACTGGCACCGTCTATCCGGATCGCGATGACCGGGA
GAAGCAGCTGTTCGAATATTTGCTTGTCGTGCGCATTGATCCCGATTGGCAACTGCTGGCAGTCTACGAGTTCGATTGGA
AAACGTTCTGCGAGGTTCGCAGCTGGGACAGGCGGACGAATGCTTGGTATGTGGGGCTTGCAGCAAAGACCCTTTCGCGA
GCGGCGCTATTCATGCCCCAGCCAGGTTAG

Upstream 100 bases:

>100_bases
AAAGCCAGCTCGCGGAGCAGGTTACAGCCTTCCTGAACAGCGGCGCCATATTCGACGAGATTGCGGAGAACCGTATTTCA
CCCACAGCGGAGGAGATTTT

Downstream 100 bases:

>100_bases
TGCCTCGCCATTAGCCTCCGGTGTCGACCGTCGACGGTCGTGCGGCCCTTGGGAAGCATGTGCGGCAGGAGTTCAATCCG
CGCTGTGAATGTCGCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSQPPPALSADPSDDFASLSDIALLRLRGRVAAELKRRGLASNVGQVAESLAIALYNGTPGRPNLQPAPTGTQNVDALSR
RGDRYSIKGVLDARKTGTVYPDRDDREKQLFEYLLVVRIDPDWQLLAVYEFDWKTFCEVRSWDRRTNAWYVGLAAKTLSR
AALFMPQPG

Sequences:

>Translated_169_residues
MSQPPPALSADPSDDFASLSDIALLRLRGRVAAELKRRGLASNVGQVAESLAIALYNGTPGRPNLQPAPTGTQNVDALSR
RGDRYSIKGVLDARKTGTVYPDRDDREKQLFEYLLVVRIDPDWQLLAVYEFDWKTFCEVRSWDRRTNAWYVGLAAKTLSR
AALFMPQPG
>Mature_168_residues
SQPPPALSADPSDDFASLSDIALLRLRGRVAAELKRRGLASNVGQVAESLAIALYNGTPGRPNLQPAPTGTQNVDALSRR
GDRYSIKGVLDARKTGTVYPDRDDREKQLFEYLLVVRIDPDWQLLAVYEFDWKTFCEVRSWDRRTNAWYVGLAAKTLSRA
ALFMPQPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18838; Mature: 18706

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPPPALSADPSDDFASLSDIALLRLRGRVAAELKRRGLASNVGQVAESLAIALYNGTP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCC
GRPNLQPAPTGTQNVDALSRRGDRYSIKGVLDARKTGTVYPDRDDREKQLFEYLLVVRID
CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHEEEEEEEC
PDWQLLAVYEFDWKTFCEVRSWDRRTNAWYVGLAAKTLSRAALFMPQPG
CCCEEEEEEECCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
SQPPPALSADPSDDFASLSDIALLRLRGRVAAELKRRGLASNVGQVAESLAIALYNGTP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCC
GRPNLQPAPTGTQNVDALSRRGDRYSIKGVLDARKTGTVYPDRDDREKQLFEYLLVVRID
CCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHEEEEEEEC
PDWQLLAVYEFDWKTFCEVRSWDRRTNAWYVGLAAKTLSRAALFMPQPG
CCCEEEEEEECCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA