Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860798

Identifier: 85860798

GI number: 85860798

Start: 2965445

End: 2966236

Strand: Direct

Name: 85860798

Synonym: SYN_00319

Alternate gene names: NA

Gene position: 2965445-2966236 (Clockwise)

Preceding gene: 85860797

Following gene: 85860802

Centisome position: 93.27

GC content: 52.02

Gene sequence:

>792_bases
ATGAATGTTGAAGAAGTCCGAGAAACTTTAGGAGACTACCTGATCAGGGAAAGGGAATCTCGAAATATCACGACGGAAGA
TCTGGCCAGAGCTACTCATCTGAGTGTTCATTTCATTGAGGCCCTTGAACATAACGATTTTTCCCGATTTTCTCAAAAAG
AATCGATCCCTGGTTTTTTAAAGCTTTATGCGAGGCATCTGCCTCTCAATTACGAGGGCGTACTGAAACGGTATCAGTTA
GAAAATGAACGCATTCTGAAACAGCTGGTCCAAAAGGAATTGCCTTTATCACGAGACTATGGCTCTCCTGTCACACAGGC
CCGGGGAAGCCGGTGGCCTGCCGGTCAGCTCGGCAGATGGATAATTCCGTCAGCCTGTGCCGTCATGGCCGTGGCCATCT
CCCTGTCCATCTATCTGGCGCCGGAAAAAGCTCAGCCGCCGGTCGTTCCCAGCTCAGCGAAGTTTTACTCGACGGCACAG
GATTTACAAAAGCCGCAGCCGGCGCCGATTCAGCCGAATCCTGTCGACGCAGATTATCCAGCCTCATCAACGCCGCTCCC
TGAGAAACCAGCAGTCCCCGCATCCGCGGAACCTTTGATGCCTTTAGAGAAACCGCCCGCCCCGGCGACGGTTTCTGAAA
CGGAAAAGGTTGTGGTTGTCGGCAATCGGGACAGTAAGCGATACCATCTTCCCGGCATGAAATATTACAACGAGGTCAAG
GCCTACCACCGGGTCCTGTTCGACTCGGAAGAAGAAGCACTGAAAGCCGGTTATTATCGAGCGAGAGAGTAG

Upstream 100 bases:

>100_bases
GAAAAAGCGTTATCTTCCCCAGTGAGATCGGCACAGTCTATCCGTAATTTCCATGCCGCAAACCGATATTATTTCTGATT
AATCTTTTAAAGAGGTTGCA

Downstream 100 bases:

>100_bases
GAACAGACAGTTTTATCCCTGTCGCGTTTCTTCATCTGCCGGGGCCGATTTTGTCGACGGCTCCTTGACAGACTGTCTAT
GCCGTCGCGCCGGCTCCTCA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNVEEVRETLGDYLIRERESRNITTEDLARATHLSVHFIEALEHNDFSRFSQKESIPGFLKLYARHLPLNYEGVLKRYQL
ENERILKQLVQKELPLSRDYGSPVTQARGSRWPAGQLGRWIIPSACAVMAVAISLSIYLAPEKAQPPVVPSSAKFYSTAQ
DLQKPQPAPIQPNPVDADYPASSTPLPEKPAVPASAEPLMPLEKPPAPATVSETEKVVVVGNRDSKRYHLPGMKYYNEVK
AYHRVLFDSEEEALKAGYYRARE

Sequences:

>Translated_263_residues
MNVEEVRETLGDYLIRERESRNITTEDLARATHLSVHFIEALEHNDFSRFSQKESIPGFLKLYARHLPLNYEGVLKRYQL
ENERILKQLVQKELPLSRDYGSPVTQARGSRWPAGQLGRWIIPSACAVMAVAISLSIYLAPEKAQPPVVPSSAKFYSTAQ
DLQKPQPAPIQPNPVDADYPASSTPLPEKPAVPASAEPLMPLEKPPAPATVSETEKVVVVGNRDSKRYHLPGMKYYNEVK
AYHRVLFDSEEEALKAGYYRARE
>Mature_263_residues
MNVEEVRETLGDYLIRERESRNITTEDLARATHLSVHFIEALEHNDFSRFSQKESIPGFLKLYARHLPLNYEGVLKRYQL
ENERILKQLVQKELPLSRDYGSPVTQARGSRWPAGQLGRWIIPSACAVMAVAISLSIYLAPEKAQPPVVPSSAKFYSTAQ
DLQKPQPAPIQPNPVDADYPASSTPLPEKPAVPASAEPLMPLEKPPAPATVSETEKVVVVGNRDSKRYHLPGMKYYNEVK
AYHRVLFDSEEEALKAGYYRARE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29639; Mature: 29639

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVEEVRETLGDYLIRERESRNITTEDLARATHLSVHFIEALEHNDFSRFSQKESIPGFL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH
KLYARHLPLNYEGVLKRYQLENERILKQLVQKELPLSRDYGSPVTQARGSRWPAGQLGRW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHCCCC
IIPSACAVMAVAISLSIYLAPEKAQPPVVPSSAKFYSTAQDLQKPQPAPIQPNPVDADYP
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ASSTPLPEKPAVPASAEPLMPLEKPPAPATVSETEKVVVVGNRDSKRYHLPGMKYYNEVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHH
AYHRVLFDSEEEALKAGYYRARE
HHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVEEVRETLGDYLIRERESRNITTEDLARATHLSVHFIEALEHNDFSRFSQKESIPGFL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHH
KLYARHLPLNYEGVLKRYQLENERILKQLVQKELPLSRDYGSPVTQARGSRWPAGQLGRW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHCCCC
IIPSACAVMAVAISLSIYLAPEKAQPPVVPSSAKFYSTAQDLQKPQPAPIQPNPVDADYP
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
ASSTPLPEKPAVPASAEPLMPLEKPPAPATVSETEKVVVVGNRDSKRYHLPGMKYYNEVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHH
AYHRVLFDSEEEALKAGYYRARE
HHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA