| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860797
Identifier: 85860797
GI number: 85860797
Start: 2964401
End: 2965369
Strand: Direct
Name: 85860797
Synonym: SYN_00320
Alternate gene names: NA
Gene position: 2964401-2965369 (Clockwise)
Preceding gene: 85860793
Following gene: 85860798
Centisome position: 93.24
GC content: 50.98
Gene sequence:
>969_bases TTGATCGAAGAAATTGCCGGAAACTTTTACAGAATTACGCTTCCCATGCCTTTTCGGCTGAATCATATTCAGTCTTTCGC CCTGGTTCAAGACAGGCATGTGACACTCTTTGACACGGACCTGGATATTCCGGAAGGAATTTCAACTCTCGAGGACTGTC TTCAGCGTATTGGTCGCTCCATCGCCGACATCGACAGGATCTTCCTCACCCATTATCATGTCGATCATTGCGGTATGGCC GGACGTTTAAAGGAAATAAGCGGCGCCCGGATCTATCTTTCCGAAGTCGACTATGAAGCCCTCCGGAATCAGAACCGTGA AAAAGAGTTATTCCAGCACATACGGCACTTCTGTCAGGAGCATGATGTATCTGATTCCCTGATCGACACGCTGCAGGAAA TTCACTTCTATTTCAGCCGAGCCACCTATCCCTTCGAAGTCGATGAACTTCTCCCTCCTTACGCGTGGTACACATCGGGC AATCGCGCCTTTCAGGCGATCCCCGCCCCCGGTCATACGCGGGGACAGGTCTGCTTTTATTTTCCCGGAGAGGCCATCCT CCTAGCCGGTGACCATGTTCTGCCGGAGATAACCCCCAATCTCAGCATCGATCTGTTTCATCCCGAATGGCATCCCCTGG GAGATTTCCTCGAATCTCTGAAACGGGTCAATACCTTGAAGGTCGATCGCGCGTTTCCATCTCACGGCAGCACCATGGAC AATTTTCCCTCCCGGATTCATGAGATCGAAGTGCATCATGGAGAACGAAAGGAACTGATTTTGCAGGCAGTGCGCGGAGG TTACGACACCGTTCGGGAAGTATCCCTGAAAATCTTCGGGGAAGACCTGCCCGAATTCGATCAATATCTGGCACTCCATG AAACCTGCGTGCACCTGCTTGAACTGAAAAGTGAAGGTTTGATCAGGGAAATGCGGTCGGGCATGAAAAAGCGTTATCTT CCCCAGTGA
Upstream 100 bases:
>100_bases GCAGTCAAAAATCTGTTGCCTATTTTCCCGATCCTCATTATAGGACAACAAAGAAATAACGGATTCCGTCATTTTTCCCG CGGAGGAGGTTTGCCGGCCC
Downstream 100 bases:
>100_bases GATCGGCACAGTCTATCCGTAATTTCCATGCCGCAAACCGATATTATTTCTGATTAATCTTTTAAAGAGGTTGCAATGAA TGTTGAAGAAGTCCGAGAAA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Zn-Dependent Hydrolases; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Family Protein / Hydrolase; Metallo-Beta-Lactamase; Metallo-Dependent Enzymatic Protein; Hydrolase; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL PQ
Sequences:
>Translated_322_residues MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL PQ >Mature_322_residues MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL PQ
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37327; Mature: 37327
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRS CCCHHCCCEEEEEECCCHHHHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH IADIDRIFLTHYHVDHCGMAGRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQE HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH HDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSGNRAFQAIPAPGHTRGQVCFY CCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCEEEECCCCCCCCCCEEEE FPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD ECCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHH NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLL HHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELKSEGLIREMRSGMKKRYLPQ HHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRS CCCHHCCCEEEEEECCCHHHHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH IADIDRIFLTHYHVDHCGMAGRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQE HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH HDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSGNRAFQAIPAPGHTRGQVCFY CCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCEEEECCCCCCCCCCEEEE FPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD ECCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHH NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLL HHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ELKSEGLIREMRSGMKKRYLPQ HHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA