Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860797

Identifier: 85860797

GI number: 85860797

Start: 2964401

End: 2965369

Strand: Direct

Name: 85860797

Synonym: SYN_00320

Alternate gene names: NA

Gene position: 2964401-2965369 (Clockwise)

Preceding gene: 85860793

Following gene: 85860798

Centisome position: 93.24

GC content: 50.98

Gene sequence:

>969_bases
TTGATCGAAGAAATTGCCGGAAACTTTTACAGAATTACGCTTCCCATGCCTTTTCGGCTGAATCATATTCAGTCTTTCGC
CCTGGTTCAAGACAGGCATGTGACACTCTTTGACACGGACCTGGATATTCCGGAAGGAATTTCAACTCTCGAGGACTGTC
TTCAGCGTATTGGTCGCTCCATCGCCGACATCGACAGGATCTTCCTCACCCATTATCATGTCGATCATTGCGGTATGGCC
GGACGTTTAAAGGAAATAAGCGGCGCCCGGATCTATCTTTCCGAAGTCGACTATGAAGCCCTCCGGAATCAGAACCGTGA
AAAAGAGTTATTCCAGCACATACGGCACTTCTGTCAGGAGCATGATGTATCTGATTCCCTGATCGACACGCTGCAGGAAA
TTCACTTCTATTTCAGCCGAGCCACCTATCCCTTCGAAGTCGATGAACTTCTCCCTCCTTACGCGTGGTACACATCGGGC
AATCGCGCCTTTCAGGCGATCCCCGCCCCCGGTCATACGCGGGGACAGGTCTGCTTTTATTTTCCCGGAGAGGCCATCCT
CCTAGCCGGTGACCATGTTCTGCCGGAGATAACCCCCAATCTCAGCATCGATCTGTTTCATCCCGAATGGCATCCCCTGG
GAGATTTCCTCGAATCTCTGAAACGGGTCAATACCTTGAAGGTCGATCGCGCGTTTCCATCTCACGGCAGCACCATGGAC
AATTTTCCCTCCCGGATTCATGAGATCGAAGTGCATCATGGAGAACGAAAGGAACTGATTTTGCAGGCAGTGCGCGGAGG
TTACGACACCGTTCGGGAAGTATCCCTGAAAATCTTCGGGGAAGACCTGCCCGAATTCGATCAATATCTGGCACTCCATG
AAACCTGCGTGCACCTGCTTGAACTGAAAAGTGAAGGTTTGATCAGGGAAATGCGGTCGGGCATGAAAAAGCGTTATCTT
CCCCAGTGA

Upstream 100 bases:

>100_bases
GCAGTCAAAAATCTGTTGCCTATTTTCCCGATCCTCATTATAGGACAACAAAGAAATAACGGATTCCGTCATTTTTCCCG
CGGAGGAGGTTTGCCGGCCC

Downstream 100 bases:

>100_bases
GATCGGCACAGTCTATCCGTAATTTCCATGCCGCAAACCGATATTATTTCTGATTAATCTTTTAAAGAGGTTGCAATGAA
TGTTGAAGAAGTCCGAGAAA

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Zn-Dependent Hydrolases; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Family Protein / Hydrolase; Metallo-Beta-Lactamase; Metallo-Dependent Enzymatic Protein; Hydrolase; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA
GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG
NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD
NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL
PQ

Sequences:

>Translated_322_residues
MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA
GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG
NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD
NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL
PQ
>Mature_322_residues
MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRSIADIDRIFLTHYHVDHCGMA
GRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQEHDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSG
NRAFQAIPAPGHTRGQVCFYFPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD
NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLLELKSEGLIREMRSGMKKRYL
PQ

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37327; Mature: 37327

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRS
CCCHHCCCEEEEEECCCHHHHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IADIDRIFLTHYHVDHCGMAGRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQE
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH
HDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSGNRAFQAIPAPGHTRGQVCFY
CCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCEEEECCCCCCCCCCEEEE
FPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD
ECCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHH
NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLL
HHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ELKSEGLIREMRSGMKKRYLPQ
HHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEEIAGNFYRITLPMPFRLNHIQSFALVQDRHVTLFDTDLDIPEGISTLEDCLQRIGRS
CCCHHCCCEEEEEECCCHHHHHHHHHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IADIDRIFLTHYHVDHCGMAGRLKEISGARIYLSEVDYEALRNQNREKELFQHIRHFCQE
HHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHH
HDVSDSLIDTLQEIHFYFSRATYPFEVDELLPPYAWYTSGNRAFQAIPAPGHTRGQVCFY
CCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEEECCCCCEEEECCCCCCCCCCEEEE
FPGEAILLAGDHVLPEITPNLSIDLFHPEWHPLGDFLESLKRVNTLKVDRAFPSHGSTMD
ECCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCHH
NFPSRIHEIEVHHGERKELILQAVRGGYDTVREVSLKIFGEDLPEFDQYLALHETCVHLL
HHHHHHEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ELKSEGLIREMRSGMKKRYLPQ
HHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA