| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860398
Identifier: 85860398
GI number: 85860398
Start: 2567914
End: 2568573
Strand: Direct
Name: 85860398
Synonym: SYN_01163
Alternate gene names: NA
Gene position: 2567914-2568573 (Clockwise)
Preceding gene: 85860396
Following gene: 85860399
Centisome position: 80.77
GC content: 57.27
Gene sequence:
>660_bases ATGCTTTGCGCGAGGTCATGTCCGGTGCCTAAAATCGTTCCTTTCGAGACTCACCATCGGCGCTATGAAGCGTGGTTTGA AAAGCATGAGGCCGTTTACATCTCCGAGCTGCTTGCCTTGCGCCCTTTCGTTCCCTGGAAAGGCAGGGGGATCGAGATCG GCGTCGGCAGCGGCCGCTTCGCCGCCCCTCTGGGTGTGCCGCTGGGTCTGGACCCCTCCCCGGCAATGCTGGCATATGCC GCATCACGCGGTATCGAGACCGTGGAAGGCGTTGCCGAGAACCTGCCTTTCGCAGCAGATACCTTTGATTACGCCTTGCT GGTGACGACCATCTGCTTCGTCGATTCCCCAATGGAGGCGCTCGCGGAGGCTCATCGAATACTCAAGCCGGGCGGCCGCC TGACAATCGGTTTCATTGACCGGGAGAGCTTCCTGGGACAGGAATACCTGGTTCACCAGAACGAAAGCGTCTTTTACCGC GAGGCCACGTTTTATTCTGCGGATGAGGTGGGGCTTTTTCTTGCAAAAACCGGTTTTTTGATTGACGACTGGGGTCAGAC ACTCGCACGCCCTCTCCACAAGATTTGCAAGATCGAACCTCTCCGGACAGGGCACGGCCAATGTGCCTTTGTGGTTGCAG CAGCAACGAAAGTGGATTAA
Upstream 100 bases:
>100_bases AGCCGCAACATCCTGATTAAGCCGCTTAACGATCCTGTACTCGGTCCGGGATATATGCGCATTACCACGGCGCTGCCGGA AGACAACCGCCGGTTCATAG
Downstream 100 bases:
>100_bases TCTGAAGCAAACGGGTTTGATCAACAAGGCTTTTCGTTTTTCCGGCGTACGCGTTTTGTTGCGCATCAGGACACTTCAAT GAACACTCTTCTCTGGATTA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD
Sequences:
>Translated_219_residues MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD >Mature_219_residues MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0638 and MJ1252 and M.tuberculosis Rv2003c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 24169; Mature: 24169
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRF CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCE AAPLGVPLGLDPSPAMLAYAASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEA ECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH LAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYREATFYSADEVGLFLAKTGFL HHHHHHHHCCCCCEEEEEECCHHHCCCHHEEECCCCEEEEEEEECCCCCCEEEEEECCCE IDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRF CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCE AAPLGVPLGLDPSPAMLAYAASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEA ECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH LAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYREATFYSADEVGLFLAKTGFL HHHHHHHHCCCCCEEEEEECCHHHCCCHHEEECCCCEEEEEEEECCCCCCEEEEEECCCE IDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]