Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860398

Identifier: 85860398

GI number: 85860398

Start: 2567914

End: 2568573

Strand: Direct

Name: 85860398

Synonym: SYN_01163

Alternate gene names: NA

Gene position: 2567914-2568573 (Clockwise)

Preceding gene: 85860396

Following gene: 85860399

Centisome position: 80.77

GC content: 57.27

Gene sequence:

>660_bases
ATGCTTTGCGCGAGGTCATGTCCGGTGCCTAAAATCGTTCCTTTCGAGACTCACCATCGGCGCTATGAAGCGTGGTTTGA
AAAGCATGAGGCCGTTTACATCTCCGAGCTGCTTGCCTTGCGCCCTTTCGTTCCCTGGAAAGGCAGGGGGATCGAGATCG
GCGTCGGCAGCGGCCGCTTCGCCGCCCCTCTGGGTGTGCCGCTGGGTCTGGACCCCTCCCCGGCAATGCTGGCATATGCC
GCATCACGCGGTATCGAGACCGTGGAAGGCGTTGCCGAGAACCTGCCTTTCGCAGCAGATACCTTTGATTACGCCTTGCT
GGTGACGACCATCTGCTTCGTCGATTCCCCAATGGAGGCGCTCGCGGAGGCTCATCGAATACTCAAGCCGGGCGGCCGCC
TGACAATCGGTTTCATTGACCGGGAGAGCTTCCTGGGACAGGAATACCTGGTTCACCAGAACGAAAGCGTCTTTTACCGC
GAGGCCACGTTTTATTCTGCGGATGAGGTGGGGCTTTTTCTTGCAAAAACCGGTTTTTTGATTGACGACTGGGGTCAGAC
ACTCGCACGCCCTCTCCACAAGATTTGCAAGATCGAACCTCTCCGGACAGGGCACGGCCAATGTGCCTTTGTGGTTGCAG
CAGCAACGAAAGTGGATTAA

Upstream 100 bases:

>100_bases
AGCCGCAACATCCTGATTAAGCCGCTTAACGATCCTGTACTCGGTCCGGGATATATGCGCATTACCACGGCGCTGCCGGA
AGACAACCGCCGGTTCATAG

Downstream 100 bases:

>100_bases
TCTGAAGCAAACGGGTTTGATCAACAAGGCTTTTCGTTTTTCCGGCGTACGCGTTTTGTTGCGCATCAGGACACTTCAAT
GAACACTCTTCTCTGGATTA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA
ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR
EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD

Sequences:

>Translated_219_residues
MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA
ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR
EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD
>Mature_219_residues
MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRFAAPLGVPLGLDPSPAMLAYA
ASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEALAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYR
EATFYSADEVGLFLAKTGFLIDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0638 and MJ1252 and M.tuberculosis Rv2003c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24169; Mature: 24169

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCE
AAPLGVPLGLDPSPAMLAYAASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEA
ECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
LAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYREATFYSADEVGLFLAKTGFL
HHHHHHHHCCCCCEEEEEECCHHHCCCHHEEECCCCEEEEEEEECCCCCCEEEEEECCCE
IDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD
EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLCARSCPVPKIVPFETHHRRYEAWFEKHEAVYISELLALRPFVPWKGRGIEIGVGSGRF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCE
AAPLGVPLGLDPSPAMLAYAASRGIETVEGVAENLPFAADTFDYALLVTTICFVDSPMEA
ECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHH
LAEAHRILKPGGRLTIGFIDRESFLGQEYLVHQNESVFYREATFYSADEVGLFLAKTGFL
HHHHHHHHCCCCCEEEEEECCHHHCCCHHEEECCCCEEEEEEEECCCCCCEEEEEECCCE
IDDWGQTLARPLHKICKIEPLRTGHGQCAFVVAAATKVD
EEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]