Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860399

Identifier: 85860399

GI number: 85860399

Start: 2568652

End: 2569392

Strand: Direct

Name: 85860399

Synonym: SYN_01162

Alternate gene names: NA

Gene position: 2568652-2569392 (Clockwise)

Preceding gene: 85860398

Following gene: 85860400

Centisome position: 80.79

GC content: 55.6

Gene sequence:

>741_bases
ATGAACACTCTTCTCTGGATTATTGTCGGCGGTCTGCTGATGAGCGCCATTGCCATGATCGGCGGCATCTCTGTTATCTT
GCCGCCTGCAGTGCTGCAGCGATTTCTTCTGCCCATGGTTGCACTTGCCGCGGGAACGCTGCTGGGCGGCGCCTTCTTCC
ACATGGTTCCCGAAGGGATAAAGACATTAGTCCCCCTTGATGCGGCGGTATGGCTCGTTGCAGGCTTTACGACGTTCCTT
CTCGTGGAACAGTTTCTCCACTGGCATCACTCGCATGACAGTGCGGCCACTGATTATGAGCCCATGACGTATCTGGTTCT
CCTCGGGGATGCCTTGCACAACTTTCTCGGCGGAATCGGGATCGCCAGCACGTTTCTCATGGATCCCAAAGCCGGGATTA
CTGCATGGTTTGCAGCCGCCGCTCATGAGGTACCTCAGGAACTCGGTGATTTCGCCATATTGGTGCATGGCGGCTGGAAC
CGATGGCGGGCGCTGCTCTGGAACGTGATTTCCGCATTGACCTTCCCTCTGGGAGCTCTGCTTGCCTACCTGTTCTCTCA
GCGCTTTTCGGTAAGCGGACTGGTTTTATTCGGAGCCGGAAACTTCCTTTACATAGCAGCCTCAGATCTTGTCCCGGAAA
TCAAGGCACATCCCAGTCTGCGCGTTGCAGCCCTTCATTTCGGCTGTTTCGCCCTGGGCCTGATCTCCATGCTGGTCCTG
GCGTATGGTTTTCACAAATGA

Upstream 100 bases:

>100_bases
AGCAGCAACGAAAGTGGATTAATCTGAAGCAAACGGGTTTGATCAACAAGGCTTTTCGTTTTTCCGGCGTACGCGTTTTG
TTGCGCATCAGGACACTTCA

Downstream 100 bases:

>100_bases
CCCTGCAACTGTTACAGGAATTGAAGGAGGGTCTATGCAACGGGTTTTGATTTCTTCGATTGCAACAGGAAGATCCGCAA
CGGGTTGCATGGTTTACAAG

Product: zinc transporter

Products: NA

Alternate protein names: ZIP Zinc Transporter; Zinc Transporter ZIP; Zinc Transporter; Transmembrane Protein; Divalent Heavy-Metal Cations Transporter; Metal Cation Transporter ZIP Family; Zinc Transporter Foi; ZIP Zinc Transporter Family

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNTLLWIIVGGLLMSAIAMIGGISVILPPAVLQRFLLPMVALAAGTLLGGAFFHMVPEGIKTLVPLDAAVWLVAGFTTFL
LVEQFLHWHHSHDSAATDYEPMTYLVLLGDALHNFLGGIGIASTFLMDPKAGITAWFAAAAHEVPQELGDFAILVHGGWN
RWRALLWNVISALTFPLGALLAYLFSQRFSVSGLVLFGAGNFLYIAASDLVPEIKAHPSLRVAALHFGCFALGLISMLVL
AYGFHK

Sequences:

>Translated_246_residues
MNTLLWIIVGGLLMSAIAMIGGISVILPPAVLQRFLLPMVALAAGTLLGGAFFHMVPEGIKTLVPLDAAVWLVAGFTTFL
LVEQFLHWHHSHDSAATDYEPMTYLVLLGDALHNFLGGIGIASTFLMDPKAGITAWFAAAAHEVPQELGDFAILVHGGWN
RWRALLWNVISALTFPLGALLAYLFSQRFSVSGLVLFGAGNFLYIAASDLVPEIKAHPSLRVAALHFGCFALGLISMLVL
AYGFHK
>Mature_246_residues
MNTLLWIIVGGLLMSAIAMIGGISVILPPAVLQRFLLPMVALAAGTLLGGAFFHMVPEGIKTLVPLDAAVWLVAGFTTFL
LVEQFLHWHHSHDSAATDYEPMTYLVLLGDALHNFLGGIGIASTFLMDPKAGITAWFAAAAHEVPQELGDFAILVHGGWN
RWRALLWNVISALTFPLGALLAYLFSQRFSVSGLVLFGAGNFLYIAASDLVPEIKAHPSLRVAALHFGCFALGLISMLVL
AYGFHK

Specific function: Unknown

COG id: COG0428

COG function: function code P; Predicted divalent heavy-metal cations transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI187936949, Length=128, Percent_Identity=34.375, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI55741750, Length=128, Percent_Identity=34.375, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI40255101, Length=228, Percent_Identity=28.0701754385965, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI153252201, Length=144, Percent_Identity=32.6388888888889, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI223633937, Length=219, Percent_Identity=29.6803652968037, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI190014617, Length=232, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI190358541, Length=119, Percent_Identity=34.453781512605, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI205830424, Length=119, Percent_Identity=34.453781512605, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI190360568, Length=119, Percent_Identity=34.453781512605, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI223633939, Length=111, Percent_Identity=36.036036036036, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI205830407, Length=114, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI24586665, Length=114, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI205830403, Length=114, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI205830405, Length=114, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI205830426, Length=115, Percent_Identity=33.9130434782609, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI153252214, Length=112, Percent_Identity=33.9285714285714, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209531, Length=216, Percent_Identity=30.5555555555556, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994730, Length=241, Percent_Identity=26.1410788381743, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538884, Length=112, Percent_Identity=33.0357142857143, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71998183, Length=147, Percent_Identity=34.6938775510204, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71992548, Length=122, Percent_Identity=31.9672131147541, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322166, Length=210, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45549201, Length=136, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161083817, Length=125, Percent_Identity=37.6, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24651189, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651193, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651187, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651191, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651195, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651197, Length=163, Percent_Identity=33.7423312883436, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24664383, Length=125, Percent_Identity=37.6, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26479; Mature: 26479

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLWIIVGGLLMSAIAMIGGISVILPPAVLQRFLLPMVALAAGTLLGGAFFHMVPEGI
CCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLVPLDAAVWLVAGFTTFLLVEQFLHWHHSHDSAATDYEPMTYLVLLGDALHNFLGGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IASTFLMDPKAGITAWFAAAAHEVPQELGDFAILVHGGWNRWRALLWNVISALTFPLGAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LAYLFSQRFSVSGLVLFGAGNFLYIAASDLVPEIKAHPSLRVAALHFGCFALGLISMLVL
HHHHHHHCCCCCCEEEEECCCEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AYGFHK
HHCCCC
>Mature Secondary Structure
MNTLLWIIVGGLLMSAIAMIGGISVILPPAVLQRFLLPMVALAAGTLLGGAFFHMVPEGI
CCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLVPLDAAVWLVAGFTTFLLVEQFLHWHHSHDSAATDYEPMTYLVLLGDALHNFLGGIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IASTFLMDPKAGITAWFAAAAHEVPQELGDFAILVHGGWNRWRALLWNVISALTFPLGAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
LAYLFSQRFSVSGLVLFGAGNFLYIAASDLVPEIKAHPSLRVAALHFGCFALGLISMLVL
HHHHHHHCCCCCCEEEEECCCEEEEEECHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AYGFHK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA