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The map label for this gene is 85860348

Identifier: 85860348

GI number: 85860348

Start: 2525806

End: 2527917

Strand: Direct

Name: 85860348

Synonym: SYN_00855

Alternate gene names: NA

Gene position: 2525806-2527917 (Clockwise)

Preceding gene: 85860347

Following gene: 85860354

Centisome position: 79.45

GC content: 56.63

Gene sequence:

>2112_bases
ATGAAACGGAAACTGTTTATTCTACTTCTTGCCGTTTTTCTGGCTGCCCCCGCTTTTGGGGCCGGCGATCTGGAGATGTT
CAACAAACGTCTCGCGGAGGCGGGAAACGAACAGGAAAAAGCGGACATTCAGAAGGAGATCGGTGATTACCATGCCGGCA
TAAGCGCCTTCGACAAGGCAGCGGATGCCTACATCAAGGCCCTCCCTCACCTGCGGGGCCGGTTGTCGGAAAATGATCGA
CTCCGGATTGCCATCCACATGTCCTGGGGAGGACGGCTCACAGAGTCTGAAATGGAAATCCGCTCCATCCTCCAGGGAAA
TCCCGAAAACACCCGCGCACGCATCCAACTGGCGCGGGTGCTGTTATGGTCGGGCAATCCGGATCAAGCCCTCGCCGAGG
CGGAAACGGTTCTGGAGAAGCTTCCCGAGGAACGGGACGCCCTGCTGGTCAAAGCGGACGCACTTCGTTCCAGAGGAGAG
ACAGACCGCGCGATTGCCATATACGGAAGTCTGCTCGAACAGTCGGAGAATTTCGACATCCGCATCGGTTTATGCCACGC
ATACCTCAAACAGGGAAATGTTAAAGAAGCTCATTCCTGTTCAGCTCTCCTTCAACCCGCATATCCCTACCAGGAGCAGG
AACTTGCGGGATTGCGCGGCGGACTCGAAAAGGCTGCCGCACAGGGTAAAAGATATACCCTCAAGGCGGAAGGGGACGCA
CTTGCTGCCCGGCAGCAGTTCACTGATGCCGCCGGAAAATACGAGGAGGTTCTGGCGCTGCCACCCCGCTTCCCCACGGA
CGAATGGCTCAGAATGGCGACGGTCATGTCCTGGGGCGGCAGACATAAAGCCGCAAAACGTGAACTGGAGGCCATTCTTG
CCCAGGAGCCGTCCCATTTCCACGCCCGGCTTCAGCTTGCCCGGGTATTGACCTGGATGGGGGAGTTCGACGCAGCGATT
CAAATGACGGAAACGCTTCTGGCGTCCCAGCCCGATGACCGCAATGTCTTCGCCTTGCTCCTTGTGAAGGCCAATGCCAC
CCGTCTCAGGGGATTTCATCGCGATGCCGACCGGCTCTATTCGACACTCCTCTCCCAGGCGGAAGATTTCGATGCCCGGC
TGGGCCTCACTTACAGTTACCTGGCAGGCGGATATCGCGTCAAGACAGATGAAAGCCTCGCCCAACTGAAGCCACGTTAC
CCTTACGAAGAAAAAGAGCTCGATCAACTGCGGGCTGCCCGGGATCGGGCATTCCGTCCCAGAATTTATGGCGGCGTCAC
GTTTTATGATGACGATGATGACAACGAGGTGACCACCTTCTCCACCGGCGCCCAGGTATGGCTGGGCAACTGGAAGACCA
ACCTGGATTACCGCCACGCCAGTGCCGATGATCCGGATCGGACGGAGGACAGCGATGCTTTGCAGCTTTCAACGTACTCC
CGGATGCCGTGGTACGGAGGTCTCGGCGGCGGGATCGGGATTTCCGGCGGCAGCATCATGACCTGGAAGGCTCTGGCTGA
TTTCGATGTATTTTATGGATCTGTCGGCTTTCTGGCCGCCCGGGAGGCCTATGCCTATACAGCGGAACTTCTCGATAACG
AAATCCGGGCGACGATCCTGGCAATTTCGATTATCCAAAGGCCGACGGACCGCATCGCCCTGCGGGGCAGTTACAGCTAT
CGCGACTTTTCCGATGACAACACTTCCAACGATATTCAGGCCGGCGTTTCTTATCTGTTTTTCCGCAAACCGGCCATGGC
TGTCGGTTACCGGTTTCGATACCTGGATTACGAGCGCCAGAGCCGGGGCGGGTATTTTGACCCGGATAATTTCCTGGCCA
ATTCAGCCTTCGTGAACCTGTCCTTCGAGACCGACCGGTTTTATGGATACATCGAGCCCTATGTCGGCTATCAGAATTAC
GAGCGCTATGACGATTCTCACAGCGAAATCTTCTATGGCTCGACAGGATCGCTCGGCTATCGCGTGAATAAATGGCTGGC
TGTCGAAGGTAACGCGGAATGGGGCAACTACGGCGGTTCGAATCTCTCCTCCGGGAGTGACGACGGCTGGTATTACAGCC
AGCTCGGCCTGCAATTCATTCTTACATTTTAG

Upstream 100 bases:

>100_bases
GAAATTAAAGGATGCCATGATTTTTGTTCAACAGGATCAGGGATGTTCATATGCATATCGCCGCATCTGCTGATCTTGAA
ATTCCGCGGGAGAAAACATC

Downstream 100 bases:

>100_bases
CATGAATTTCCAGGCGCCCTGGATTTTCGACCGCGCATCCCGGTCTCACTCGTGCCGCAGGGCCACAATGGGGTCCAGGC
GGGCGGCCTTGAGGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MKRKLFILLLAVFLAAPAFGAGDLEMFNKRLAEAGNEQEKADIQKEIGDYHAGISAFDKAADAYIKALPHLRGRLSENDR
LRIAIHMSWGGRLTESEMEIRSILQGNPENTRARIQLARVLLWSGNPDQALAEAETVLEKLPEERDALLVKADALRSRGE
TDRAIAIYGSLLEQSENFDIRIGLCHAYLKQGNVKEAHSCSALLQPAYPYQEQELAGLRGGLEKAAAQGKRYTLKAEGDA
LAARQQFTDAAGKYEEVLALPPRFPTDEWLRMATVMSWGGRHKAAKRELEAILAQEPSHFHARLQLARVLTWMGEFDAAI
QMTETLLASQPDDRNVFALLLVKANATRLRGFHRDADRLYSTLLSQAEDFDARLGLTYSYLAGGYRVKTDESLAQLKPRY
PYEEKELDQLRAARDRAFRPRIYGGVTFYDDDDDNEVTTFSTGAQVWLGNWKTNLDYRHASADDPDRTEDSDALQLSTYS
RMPWYGGLGGGIGISGGSIMTWKALADFDVFYGSVGFLAAREAYAYTAELLDNEIRATILAISIIQRPTDRIALRGSYSY
RDFSDDNTSNDIQAGVSYLFFRKPAMAVGYRFRYLDYERQSRGGYFDPDNFLANSAFVNLSFETDRFYGYIEPYVGYQNY
ERYDDSHSEIFYGSTGSLGYRVNKWLAVEGNAEWGNYGGSNLSSGSDDGWYYSQLGLQFILTF

Sequences:

>Translated_703_residues
MKRKLFILLLAVFLAAPAFGAGDLEMFNKRLAEAGNEQEKADIQKEIGDYHAGISAFDKAADAYIKALPHLRGRLSENDR
LRIAIHMSWGGRLTESEMEIRSILQGNPENTRARIQLARVLLWSGNPDQALAEAETVLEKLPEERDALLVKADALRSRGE
TDRAIAIYGSLLEQSENFDIRIGLCHAYLKQGNVKEAHSCSALLQPAYPYQEQELAGLRGGLEKAAAQGKRYTLKAEGDA
LAARQQFTDAAGKYEEVLALPPRFPTDEWLRMATVMSWGGRHKAAKRELEAILAQEPSHFHARLQLARVLTWMGEFDAAI
QMTETLLASQPDDRNVFALLLVKANATRLRGFHRDADRLYSTLLSQAEDFDARLGLTYSYLAGGYRVKTDESLAQLKPRY
PYEEKELDQLRAARDRAFRPRIYGGVTFYDDDDDNEVTTFSTGAQVWLGNWKTNLDYRHASADDPDRTEDSDALQLSTYS
RMPWYGGLGGGIGISGGSIMTWKALADFDVFYGSVGFLAAREAYAYTAELLDNEIRATILAISIIQRPTDRIALRGSYSY
RDFSDDNTSNDIQAGVSYLFFRKPAMAVGYRFRYLDYERQSRGGYFDPDNFLANSAFVNLSFETDRFYGYIEPYVGYQNY
ERYDDSHSEIFYGSTGSLGYRVNKWLAVEGNAEWGNYGGSNLSSGSDDGWYYSQLGLQFILTF
>Mature_703_residues
MKRKLFILLLAVFLAAPAFGAGDLEMFNKRLAEAGNEQEKADIQKEIGDYHAGISAFDKAADAYIKALPHLRGRLSENDR
LRIAIHMSWGGRLTESEMEIRSILQGNPENTRARIQLARVLLWSGNPDQALAEAETVLEKLPEERDALLVKADALRSRGE
TDRAIAIYGSLLEQSENFDIRIGLCHAYLKQGNVKEAHSCSALLQPAYPYQEQELAGLRGGLEKAAAQGKRYTLKAEGDA
LAARQQFTDAAGKYEEVLALPPRFPTDEWLRMATVMSWGGRHKAAKRELEAILAQEPSHFHARLQLARVLTWMGEFDAAI
QMTETLLASQPDDRNVFALLLVKANATRLRGFHRDADRLYSTLLSQAEDFDARLGLTYSYLAGGYRVKTDESLAQLKPRY
PYEEKELDQLRAARDRAFRPRIYGGVTFYDDDDDNEVTTFSTGAQVWLGNWKTNLDYRHASADDPDRTEDSDALQLSTYS
RMPWYGGLGGGIGISGGSIMTWKALADFDVFYGSVGFLAAREAYAYTAELLDNEIRATILAISIIQRPTDRIALRGSYSY
RDFSDDNTSNDIQAGVSYLFFRKPAMAVGYRFRYLDYERQSRGGYFDPDNFLANSAFVNLSFETDRFYGYIEPYVGYQNY
ERYDDSHSEIFYGSTGSLGYRVNKWLAVEGNAEWGNYGGSNLSSGSDDGWYYSQLGLQFILTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79132; Mature: 79132

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLFILLLAVFLAAPAFGAGDLEMFNKRLAEAGNEQEKADIQKEIGDYHAGISAFDKA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH
ADAYIKALPHLRGRLSENDRLRIAIHMSWGGRLTESEMEIRSILQGNPENTRARIQLARV
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEH
LLWSGNPDQALAEAETVLEKLPEERDALLVKADALRSRGETDRAIAIYGSLLEQSENFDI
EEECCCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCCCCCEEHHHHHHHHCCCCCEE
RIGLCHAYLKQGNVKEAHSCSALLQPAYPYQEQELAGLRGGLEKAAAQGKRYTLKAEGDA
EEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCH
LAARQQFTDAAGKYEEVLALPPRFPTDEWLRMATVMSWGGRHKAAKRELEAILAQEPSHF
HHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH
HARLQLARVLTWMGEFDAAIQMTETLLASQPDDRNVFALLLVKANATRLRGFHRDADRLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHCCCCCHHHHH
STLLSQAEDFDARLGLTYSYLAGGYRVKTDESLAQLKPRYPYEEKELDQLRAARDRAFRP
HHHHHHHHCCCHHCCCEEHHHCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
RIYGGVTFYDDDDDNEVTTFSTGAQVWLGNWKTNLDYRHASADDPDRTEDSDALQLSTYS
EEECCEEEECCCCCCCEEEEECCCEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECC
RMPWYGGLGGGIGISGGSIMTWKALADFDVFYGSVGFLAAREAYAYTAELLDNEIRATIL
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AISIIQRPTDRIALRGSYSYRDFSDDNTSNDIQAGVSYLFFRKPAMAVGYRFRYLDYERQ
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCEEEEEECCHHH
SRGGYFDPDNFLANSAFVNLSFETDRFYGYIEPYVGYQNYERYDDSHSEIFYGSTGSLGY
CCCCCCCCHHHCCCCEEEEEEEECCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCE
RVNKWLAVEGNAEWGNYGGSNLSSGSDDGWYYSQLGLQFILTF
EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHCEEEEEEC
>Mature Secondary Structure
MKRKLFILLLAVFLAAPAFGAGDLEMFNKRLAEAGNEQEKADIQKEIGDYHAGISAFDKA
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH
ADAYIKALPHLRGRLSENDRLRIAIHMSWGGRLTESEMEIRSILQGNPENTRARIQLARV
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEH
LLWSGNPDQALAEAETVLEKLPEERDALLVKADALRSRGETDRAIAIYGSLLEQSENFDI
EEECCCCCHHHHHHHHHHHHCCCCHHEEEEEHHHHHCCCCCCCEEHHHHHHHHCCCCCEE
RIGLCHAYLKQGNVKEAHSCSALLQPAYPYQEQELAGLRGGLEKAAAQGKRYTLKAEGDA
EEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCH
LAARQQFTDAAGKYEEVLALPPRFPTDEWLRMATVMSWGGRHKAAKRELEAILAQEPSHF
HHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH
HARLQLARVLTWMGEFDAAIQMTETLLASQPDDRNVFALLLVKANATRLRGFHRDADRLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHCCCCCHHHHH
STLLSQAEDFDARLGLTYSYLAGGYRVKTDESLAQLKPRYPYEEKELDQLRAARDRAFRP
HHHHHHHHCCCHHCCCEEHHHCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
RIYGGVTFYDDDDDNEVTTFSTGAQVWLGNWKTNLDYRHASADDPDRTEDSDALQLSTYS
EEECCEEEECCCCCCCEEEEECCCEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECC
RMPWYGGLGGGIGISGGSIMTWKALADFDVFYGSVGFLAAREAYAYTAELLDNEIRATIL
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AISIIQRPTDRIALRGSYSYRDFSDDNTSNDIQAGVSYLFFRKPAMAVGYRFRYLDYERQ
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCEEEEEECCHHH
SRGGYFDPDNFLANSAFVNLSFETDRFYGYIEPYVGYQNYERYDDSHSEIFYGSTGSLGY
CCCCCCCCHHHCCCCEEEEEEEECCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCE
RVNKWLAVEGNAEWGNYGGSNLSSGSDDGWYYSQLGLQFILTF
EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA