Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860081

Identifier: 85860081

GI number: 85860081

Start: 2289737

End: 2290297

Strand: Direct

Name: 85860081

Synonym: SYN_01556

Alternate gene names: NA

Gene position: 2289737-2290297 (Clockwise)

Preceding gene: 85860080

Following gene: 85860082

Centisome position: 72.02

GC content: 48.66

Gene sequence:

>561_bases
ATGTTCTTTAAAACTTTTATGCCATACTGGTCCGGTCTGCGGCAGCGGGAGCGAATCGTCCTGGGCGGAGGGTTGATCTG
CCTTTTTCTGCTCCTGCTTACTCATTTTATTCTCCTGCCCTTTTTCGAAGCAAGGGACAAAATGACCCGTTCGATTGCCC
GGCAGGAAAAGGTTCTTCAGGAACTGACCGAACTGAAAGCGCAATACCAGAGCCTCAAGGGAGGAACCGATGTCCTCCGG
CAGGTGATGGAAAGGAGAAGTCCCGATTTTACCATGGCTTCTCACCTGGATCGGATCATTAACGAAACGGATATGAAATC
ATGCATTCAGGATTTTCAATCCACGAAATCCCAGGCCGGCGAAGGATACGATTTAATCCGGACAGAGATTAAAATCGCCC
GGGTCACAATGGATCAGCTCATTCAATTTCTTTATCTCGCGGAATCACCGGAATACGGAATCTGGATAGAGCAGATATCC
ATTGCCGGAGGCCCTGCGGAAACCGGGTTTTTAAGCGCCACCCTGGCTCTGAAAACTTATGAAAAAACGCCTTCGATATA
A

Upstream 100 bases:

>100_bases
GGCGAACTGGAAAAATCCCGATCCTTCTCCAACATCCAGATGCAGTTTGGCAGCGGCACGAACAAAGACGCGAAAAAAAC
GTTCAAATTAAGGATGACCC

Downstream 100 bases:

>100_bases
GGAGGAGTCGGAAATCCGTCTCTTCTGCTGAAAACGCCCACTTCATACGGATTGTCGACGAATTCGGAGAAAAGACCTGA
AGCCGTCGCAAAGAGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFFKTFMPYWSGLRQRERIVLGGGLICLFLLLLTHFILLPFFEARDKMTRSIARQEKVLQELTELKAQYQSLKGGTDVLR
QVMERRSPDFTMASHLDRIINETDMKSCIQDFQSTKSQAGEGYDLIRTEIKIARVTMDQLIQFLYLAESPEYGIWIEQIS
IAGGPAETGFLSATLALKTYEKTPSI

Sequences:

>Translated_186_residues
MFFKTFMPYWSGLRQRERIVLGGGLICLFLLLLTHFILLPFFEARDKMTRSIARQEKVLQELTELKAQYQSLKGGTDVLR
QVMERRSPDFTMASHLDRIINETDMKSCIQDFQSTKSQAGEGYDLIRTEIKIARVTMDQLIQFLYLAESPEYGIWIEQIS
IAGGPAETGFLSATLALKTYEKTPSI
>Mature_186_residues
MFFKTFMPYWSGLRQRERIVLGGGLICLFLLLLTHFILLPFFEARDKMTRSIARQEKVLQELTELKAQYQSLKGGTDVLR
QVMERRSPDFTMASHLDRIINETDMKSCIQDFQSTKSQAGEGYDLIRTEIKIARVTMDQLIQFLYLAESPEYGIWIEQIS
IAGGPAETGFLSATLALKTYEKTPSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21342; Mature: 21342

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKTFMPYWSGLRQRERIVLGGGLICLFLLLLTHFILLPFFEARDKMTRSIARQEKVLQ
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTELKAQYQSLKGGTDVLRQVMERRSPDFTMASHLDRIINETDMKSCIQDFQSTKSQAG
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
EGYDLIRTEIKIARVTMDQLIQFLYLAESPEYGIWIEQISIAGGPAETGFLSATLALKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHEECCCCCCCHHHHHHHHHHHHH
EKTPSI
HCCCCC
>Mature Secondary Structure
MFFKTFMPYWSGLRQRERIVLGGGLICLFLLLLTHFILLPFFEARDKMTRSIARQEKVLQ
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELTELKAQYQSLKGGTDVLRQVMERRSPDFTMASHLDRIINETDMKSCIQDFQSTKSQAG
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
EGYDLIRTEIKIARVTMDQLIQFLYLAESPEYGIWIEQISIAGGPAETGFLSATLALKTY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHEECCCCCCCHHHHHHHHHHHHH
EKTPSI
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA