Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85860077

Identifier: 85860077

GI number: 85860077

Start: 2286151

End: 2286588

Strand: Direct

Name: 85860077

Synonym: SYN_03707

Alternate gene names: NA

Gene position: 2286151-2286588 (Clockwise)

Preceding gene: 85860076

Following gene: 85860078

Centisome position: 71.91

GC content: 54.11

Gene sequence:

>438_bases
GTGAGCTTGAAATCCGTGATGAGCCTGCTGAAGATCTGGAGTGAAGCCGGTCAGACCATGATGAAAACGGAAAAAAGACA
AAAGGGGTTTACCCTGATAGAGATGATGATCGCTTTGACGGTCCTGGCTCTCGTCGTTGCGGCGGTTTCCCACGCTTTGG
CACAGAGCCTCGCCATGGCTCACCGGATCAAAAAGGATACAACGCTGTCTCTGCTGGCACAGAGCAAAATGGCGGAGATC
GAGGCGGCAAAGGAAGGCGCCGCTTCGGATCATGGAAATTTCGGCGGCAACTTTTCCCAATATGGGTGGCAGGTTTCCGT
CCGGGGAAGCGGCATCTCGACCCTGAAGAAGGTGGAGGTGACGGTTTTGGATACCCTTTCGGAAAAACGCGAAAGTTTCC
GTCTCACCAGCCTCCAGTACAGGGAGGAATCCCCATGA

Upstream 100 bases:

>100_bases
GCCACCGTCCTTTTGTCCGGACAGGGGTACGCTCAACCGGCCGTTATCCATCTCCGCCGGGATGACTGTGCCGTAAGTCT
GACCATCAGCCCCTTCCTGA

Downstream 100 bases:

>100_bases
GGCATCCTCCGGAAACAAGTAAAAACGGCGGAGAGGCGGGGTTCACGCTCTTCGAGATTCTAGTCGCACTTTTTATCCTT
ACGCTTATTTTTTCCGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEI
EAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP

Sequences:

>Translated_145_residues
MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEI
EAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP
>Mature_144_residues
SLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMAHRIKKDTTLSLLAQSKMAEIE
AAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEVTVLDTLSEKRESFRLTSLQYREESP

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15895; Mature: 15763

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRIKKDTTLSLLAQSKMAEIEAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEV
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEECCCCHHHHHHHHH
TVLDTLSEKRESFRLTSLQYREESP
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLKSVMSLLKIWSEAGQTMMKTEKRQKGFTLIEMMIALTVLALVVAAVSHALAQSLAMA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRIKKDTTLSLLAQSKMAEIEAAKEGAASDHGNFGGNFSQYGWQVSVRGSGISTLKKVEV
HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCEEEECCCCHHHHHHHHH
TVLDTLSEKRESFRLTSLQYREESP
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA