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The map label for this gene is glyQ

Identifier: 85860060

GI number: 85860060

Start: 2272111

End: 2272989

Strand: Direct

Name: glyQ

Synonym: SYN_01536

Alternate gene names: 85860060

Gene position: 2272111-2272989 (Clockwise)

Preceding gene: 85860059

Following gene: 85860061

Centisome position: 71.47

GC content: 55.18

Gene sequence:

>879_bases
GTGACCTTTCAGGAACTGATCTTTGCCCTTGAAAATTACTGGGCGAAACAAGGCTGTGTGATTCAACAGCCTTATGACAT
CGAAGTGGGAGCGGGGACATTCAATCCCGCTACCTTTCTGCGGGCTCTGGGACCGGAACCCTGGAATGTGGCCTACGTGG
AACCGTCGCGCCGGCCAACGGACGGCCGTTACGGCGAGAATCCGAACCGCCTGCAGCATTACTACCAGTATCAGGTCATC
ATGAAACCGTCCCCTCTGAACATCCAGGAGCTGTATCTCGATTCTCTCCGGAGTTTCGGCATCGACCCGCTGGAACACGA
TATCCGTTTCGTTGAAGACGACTGGGAGTCACCCACTGTGGGGGCGTGGGGGCTGGGCTGGGAAGTCTGGCTGGACGGCA
TGGAAATCTCCCAATTCACCTATTTTCAGCAGGTCGGCGGCATCGACGTGAAACCCGTCTGCGCGGAACTGACCTACGGC
ATCGAGCGCATCGCCATGTACATCCAGGGGATCGACAATGTCTATGATCTTCAATGGAATGATTCCATCAAATACGGCGA
CGTCCATCACCAGGGAGAGGTTGAATTTTCAACCTACAACTTTGAAGTCGCCGATGTGGACATGCTGAGAAAACTCTTCG
ACATGTACGAGGCCGAAGCCATCCGGACGGCGGAAAAGGATCTGGTCCTTCCCGCTTACGATTACTGCCTCAAATGTTCC
CACACGTTCAACCTCCTCAATGCCCGGGGCGCCATCAGCGTGGCGGAGCGGACCAGTTATATCGGCAGAGTCCGCAATCT
TGCCAGAATTTCCGCAGAAGGATATATCCGGCAGCGTGAACGCATGGGGTTCCCCCTGCTGAACAGATCGGAGGATTGA

Upstream 100 bases:

>100_bases
GTCTTTTTCATATTGACACGCCCCTCTCATCATGATAGGTAAGCTGCCGGAAACGCTGAATAAATCATGTAAATGACAAG
AAAAGCACAGGAGGTTTAAG

Downstream 100 bases:

>100_bases
CACTCGGATTCCTCAGGTAAAACAGGATCAACATTTCCGCTTTTTTGAAAGCTATTCTTAAAGATGGGAGAATCAGATGA
GCAATGAGTTGCTGCTTGAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTFQELIFALENYWAKQGCVIQQPYDIEVGAGTFNPATFLRALGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQYQVI
MKPSPLNIQELYLDSLRSFGIDPLEHDIRFVEDDWESPTVGAWGLGWEVWLDGMEISQFTYFQQVGGIDVKPVCAELTYG
IERIAMYIQGIDNVYDLQWNDSIKYGDVHHQGEVEFSTYNFEVADVDMLRKLFDMYEAEAIRTAEKDLVLPAYDYCLKCS
HTFNLLNARGAISVAERTSYIGRVRNLARISAEGYIRQRERMGFPLLNRSED

Sequences:

>Translated_292_residues
MTFQELIFALENYWAKQGCVIQQPYDIEVGAGTFNPATFLRALGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQYQVI
MKPSPLNIQELYLDSLRSFGIDPLEHDIRFVEDDWESPTVGAWGLGWEVWLDGMEISQFTYFQQVGGIDVKPVCAELTYG
IERIAMYIQGIDNVYDLQWNDSIKYGDVHHQGEVEFSTYNFEVADVDMLRKLFDMYEAEAIRTAEKDLVLPAYDYCLKCS
HTFNLLNARGAISVAERTSYIGRVRNLARISAEGYIRQRERMGFPLLNRSED
>Mature_291_residues
TFQELIFALENYWAKQGCVIQQPYDIEVGAGTFNPATFLRALGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQYQVIM
KPSPLNIQELYLDSLRSFGIDPLEHDIRFVEDDWESPTVGAWGLGWEVWLDGMEISQFTYFQQVGGIDVKPVCAELTYGI
ERIAMYIQGIDNVYDLQWNDSIKYGDVHHQGEVEFSTYNFEVADVDMLRKLFDMYEAEAIRTAEKDLVLPAYDYCLKCSH
TFNLLNARGAISVAERTSYIGRVRNLARISAEGYIRQRERMGFPLLNRSED

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=296, Percent_Identity=64.8648648648649, Blast_Score=404, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_SYNAS (Q2LVI0)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_462262.1
- HSSP:   Q9WY59
- ProteinModelPortal:   Q2LVI0
- SMR:   Q2LVI0
- STRING:   Q2LVI0
- GeneID:   3884073
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_01536
- NMPDR:   fig|56780.10.peg.2198
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   Q2LVI0
- ProtClustDB:   PRK09348
- BioCyc:   SACI56780:SYN_01536-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 33809; Mature: 33678

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQELIFALENYWAKQGCVIQQPYDIEVGAGTFNPATFLRALGPEPWNVAYVEPSRRPT
CCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQYQVIMKPSPLNIQELYLDSLRSFGIDPLEHDIRFVEDDWESPTV
CCCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCC
GAWGLGWEVWLDGMEISQFTYFQQVGGIDVKPVCAELTYGIERIAMYIQGIDNVYDLQWN
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DSIKYGDVHHQGEVEFSTYNFEVADVDMLRKLFDMYEAEAIRTAEKDLVLPAYDYCLKCS
CCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
HTFNLLNARGAISVAERTSYIGRVRNLARISAEGYIRQRERMGFPLLNRSED
CHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TFQELIFALENYWAKQGCVIQQPYDIEVGAGTFNPATFLRALGPEPWNVAYVEPSRRPT
CHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQYQVIMKPSPLNIQELYLDSLRSFGIDPLEHDIRFVEDDWESPTV
CCCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCC
GAWGLGWEVWLDGMEISQFTYFQQVGGIDVKPVCAELTYGIERIAMYIQGIDNVYDLQWN
CCCCCCHHHEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
DSIKYGDVHHQGEVEFSTYNFEVADVDMLRKLFDMYEAEAIRTAEKDLVLPAYDYCLKCS
CCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
HTFNLLNARGAISVAERTSYIGRVRNLARISAEGYIRQRERMGFPLLNRSED
CHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA