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The map label for this gene is recO [H]

Identifier: 85860059

GI number: 85860059

Start: 2271174

End: 2272007

Strand: Direct

Name: recO [H]

Synonym: SYN_01535

Alternate gene names: 85860059

Gene position: 2271174-2272007 (Clockwise)

Preceding gene: 85860058

Following gene: 85860060

Centisome position: 71.44

GC content: 50.24

Gene sequence:

>834_bases
ATGCGGCTTTCTCTCATTCCTGGGGCTGGCCACGCTTTTTTTGAAACTACTGACATGAATACCCGGGCGACGCATAAAAC
GGAAGGGTTTGTCCTGAAAACGCTGAGCTACAGCGATTCGGACCTTATCGTGACCTTCTATACGCGGAATTTCGGAAAAC
TGACAGCAATCGCCAGAGGAGCCAGAAAAAGCAGAAAGCGGTTCGTCAATGTCCTGGAACCCTTCTGCTGTTCTTCCCTG
CTTTTTTCCCGAAAGCAGAGGGACCAGCTGGCATGGCTTGAAAGCTGCCAGGTGATCAACGAATTTCCTGAAATCAGGAA
GTCACTGGACAGAACGCTTCTTGCCTCATATCTCATCGACCTGGTTGATCATTTCTCTATCGAAGAAAAACCGGGCAGGG
AACTGTTCGAACTTCTGCGCTCCTTTCTTCTTCTCATTGAAGAAGGCGACACATCGGAACGGCTTCTGCGATTCTTTGAA
ATCCGCCACCTGAAACTGACGGGTTACGCGCCGGCTCTCGACTGCTGCATGATCTGCAAGGCCCCTCTGAATCCGCAGCA
GAGGTACGTCTTCAATATCGCTCAGGGAGGGCTGCATTGCAGGTCCTGTTATACGACTCCAGCCGCTCCGGATGTCCTGC
CGATCTCCGTCGGCACCATTAAAACCCTGCTGCTGGGCAGAGAGATTGAAACAGAAAAAATGAAACGAATTCTTTTTTCA
GGGCAAACGGCGCGGGAAAGCAAATCCCTTCTTTCTCTTTTTATCGGTCATATCCTGGGAAAAGAACTGAAATCGCTGAA
AGTCCTCGACGAGATCCAGAGGATGGGATTGTAA

Upstream 100 bases:

>100_bases
TCGGGACCCTGGCCGGAACTCTCATTCCCCTGACCCTGAAATGGCTGAAACTCGATCCTGCCCTGGGTTCCAACGTATTT
GTCACGGCTCTGACTGATGT

Downstream 100 bases:

>100_bases
AGGGTCTTTTTCATATTGACACGCCCCTCTCATCATGATAGGTAAGCTGCCGGAAACGCTGAATAAATCATGTAAATGAC
AAGAAAAGCACAGGAGGTTT

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRLSLIPGAGHAFFETTDMNTRATHKTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSL
LFSRKQRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLLIEEGDTSERLLRFFE
IRHLKLTGYAPALDCCMICKAPLNPQQRYVFNIAQGGLHCRSCYTTPAAPDVLPISVGTIKTLLLGREIETEKMKRILFS
GQTARESKSLLSLFIGHILGKELKSLKVLDEIQRMGL

Sequences:

>Translated_277_residues
MRLSLIPGAGHAFFETTDMNTRATHKTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSL
LFSRKQRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLLIEEGDTSERLLRFFE
IRHLKLTGYAPALDCCMICKAPLNPQQRYVFNIAQGGLHCRSCYTTPAAPDVLPISVGTIKTLLLGREIETEKMKRILFS
GQTARESKSLLSLFIGHILGKELKSLKVLDEIQRMGL
>Mature_277_residues
MRLSLIPGAGHAFFETTDMNTRATHKTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARGARKSRKRFVNVLEPFCCSSL
LFSRKQRDQLAWLESCQVINEFPEIRKSLDRTLLASYLIDLVDHFSIEEKPGRELFELLRSFLLLIEEGDTSERLLRFFE
IRHLKLTGYAPALDCCMICKAPLNPQQRYVFNIAQGGLHCRSCYTTPAAPDVLPISVGTIKTLLLGREIETEKMKRILFS
GQTARESKSLLSLFIGHILGKELKSLKVLDEIQRMGL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 31542; Mature: 31542

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLIPGAGHAFFETTDMNTRATHKTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARG
CEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHH
ARKSRKRFVNVLEPFCCSSLLFSRKQRDQLAWLESCQVINEFPEIRKSLDRTLLASYLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDHFSIEEKPGRELFELLRSFLLLIEEGDTSERLLRFFEIRHLKLTGYAPALDCCMICK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHC
APLNPQQRYVFNIAQGGLHCRSCYTTPAAPDVLPISVGTIKTLLLGREIETEKMKRILFS
CCCCCCHHHEEEHHCCCCEEHHCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHC
GQTARESKSLLSLFIGHILGKELKSLKVLDEIQRMGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLSLIPGAGHAFFETTDMNTRATHKTEGFVLKTLSYSDSDLIVTFYTRNFGKLTAIARG
CEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHH
ARKSRKRFVNVLEPFCCSSLLFSRKQRDQLAWLESCQVINEFPEIRKSLDRTLLASYLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVDHFSIEEKPGRELFELLRSFLLLIEEGDTSERLLRFFEIRHLKLTGYAPALDCCMICK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHC
APLNPQQRYVFNIAQGGLHCRSCYTTPAAPDVLPISVGTIKTLLLGREIETEKMKRILFS
CCCCCCHHHEEEHHCCCCEEHHCCCCCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHC
GQTARESKSLLSLFIGHILGKELKSLKVLDEIQRMGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA