Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859887

Identifier: 85859887

GI number: 85859887

Start: 2123862

End: 2124899

Strand: Direct

Name: 85859887

Synonym: SYN_00500

Alternate gene names: NA

Gene position: 2123862-2124899 (Clockwise)

Preceding gene: 85859885

Following gene: 85859888

Centisome position: 66.8

GC content: 36.8

Gene sequence:

>1038_bases
TTGTGGTCAAGGCAATCCCGAATTTTGAGTAGGTATAAGCAAATGCCAGTAGTCCATTTCTTAAATGTTAAAGAAGGTGA
TTGCTCAATTATTGAGCATACATCTGGGCATATTTCTGTAATCGATGTATGTAACGCCCGCAAAGAAACTCCGGAATCAA
AAATTGTCGAGTCAATTGTTAAAAATATTATGACGAAGGCAGCAGGTTCAGGAAATCTTAACCAAAAAGCTTATCCGGTA
AATCCAATTTCTTACATGAAAGAGCGTTCCTTAACTTCTGTTTTTAGATTTGTTGCCACGCATCCGGATATGGATCATAT
AGATGGTATCAAAGATTTTTTTGAGGAATTTAATCCGACAAATTTTTACGATATTGAAAACGAAAAGGAAATCGAGTTTA
ACGATAAATCTCCATATCTAGAGGAAGATTGGAAATTTTACAAAAATCTAAGAGACACCGACCCTGATACAGATCCTCGT
CGTTTGACACTCTTTTCTGGCGATTCTGGAATTTACAGGACAAAGAATTGGGATGGCAATCCTCCTGGTGATGCTTTTTA
TGTTCTTGCCCCAACATCTGAGATGGTTAGAGAGGCAAAAGAATTGGAAGATTACAATGATTGTTCTTATGTAATTCTGT
ATCGTAGCCCTGGTGGAAAGATACTGTTTGGGGGTGATAGTCACGATGGAACATGGGAACATTTATTGAAAAATCATGAA
AATTCTATAAAAAACGTAGATTTACTCATTGCTCCGCATCATGGCCGGAAATCAGACAGGGATTATAGTTTTCTTGACGT
AGTGAATCCAAAAATGACTTTCTTTGGAAACGCGCGATCAGAACACTTGGCTTATTCAGCATGGAGTTCCAGAAATCTTC
CTTACATAACAAATAATCAGGCGGACTGTATGATCGTTAATGCCAACGACGAGCATATGCCAATTTATGTCACTAATGAA
ACCTTCGCTAAACAGAGAAATCCCAAAAGTCAATATTCAAGTAGATTTAAAGGATGGTTTTTGCAAAATATAAAATAA

Upstream 100 bases:

>100_bases
GAGTTTCATCGAACCCAGAATGCTATCATTCTTAAACCGAGGTCGCCCAATCCGAATCATAAGCCGATTATTTTAACTTC
CGATTTCCGAATTCAAGGGA

Downstream 100 bases:

>100_bases
TTGCTTATGAAAATTCATATCTTTGATGTTGAGCATGGCGAATGTAATGCCATAGAAACTCCCTCTGGGCACCTGTTTTT
GATTGGTACAGGCCATAATT

Product: metallo-beta-lactamase superfamily hydrolase

Products: NA

Alternate protein names: Hydrolase

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MWSRQSRILSRYKQMPVVHFLNVKEGDCSIIEHTSGHISVIDVCNARKETPESKIVESIVKNIMTKAAGSGNLNQKAYPV
NPISYMKERSLTSVFRFVATHPDMDHIDGIKDFFEEFNPTNFYDIENEKEIEFNDKSPYLEEDWKFYKNLRDTDPDTDPR
RLTLFSGDSGIYRTKNWDGNPPGDAFYVLAPTSEMVREAKELEDYNDCSYVILYRSPGGKILFGGDSHDGTWEHLLKNHE
NSIKNVDLLIAPHHGRKSDRDYSFLDVVNPKMTFFGNARSEHLAYSAWSSRNLPYITNNQADCMIVNANDEHMPIYVTNE
TFAKQRNPKSQYSSRFKGWFLQNIK

Sequences:

>Translated_345_residues
MWSRQSRILSRYKQMPVVHFLNVKEGDCSIIEHTSGHISVIDVCNARKETPESKIVESIVKNIMTKAAGSGNLNQKAYPV
NPISYMKERSLTSVFRFVATHPDMDHIDGIKDFFEEFNPTNFYDIENEKEIEFNDKSPYLEEDWKFYKNLRDTDPDTDPR
RLTLFSGDSGIYRTKNWDGNPPGDAFYVLAPTSEMVREAKELEDYNDCSYVILYRSPGGKILFGGDSHDGTWEHLLKNHE
NSIKNVDLLIAPHHGRKSDRDYSFLDVVNPKMTFFGNARSEHLAYSAWSSRNLPYITNNQADCMIVNANDEHMPIYVTNE
TFAKQRNPKSQYSSRFKGWFLQNIK
>Mature_345_residues
MWSRQSRILSRYKQMPVVHFLNVKEGDCSIIEHTSGHISVIDVCNARKETPESKIVESIVKNIMTKAAGSGNLNQKAYPV
NPISYMKERSLTSVFRFVATHPDMDHIDGIKDFFEEFNPTNFYDIENEKEIEFNDKSPYLEEDWKFYKNLRDTDPDTDPR
RLTLFSGDSGIYRTKNWDGNPPGDAFYVLAPTSEMVREAKELEDYNDCSYVILYRSPGGKILFGGDSHDGTWEHLLKNHE
NSIKNVDLLIAPHHGRKSDRDYSFLDVVNPKMTFFGNARSEHLAYSAWSSRNLPYITNNQADCMIVNANDEHMPIYVTNE
TFAKQRNPKSQYSSRFKGWFLQNIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39926; Mature: 39926

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSRQSRILSRYKQMPVVHFLNVKEGDCSIIEHTSGHISVIDVCNARKETPESKIVESIV
CCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
KNIMTKAAGSGNLNQKAYPVNPISYMKERSLTSVFRFVATHPDMDHIDGIKDFFEEFNPT
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NFYDIENEKEIEFNDKSPYLEEDWKFYKNLRDTDPDTDPRRLTLFSGDSGIYRTKNWDGN
CEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCC
PPGDAFYVLAPTSEMVREAKELEDYNDCSYVILYRSPGGKILFGGDSHDGTWEHLLKNHE
CCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCC
NSIKNVDLLIAPHHGRKSDRDYSFLDVVNPKMTFFGNARSEHLAYSAWSSRNLPYITNNQ
CCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEECCCCCCCCEEECCC
ADCMIVNANDEHMPIYVTNETFAKQRNPKSQYSSRFKGWFLQNIK
CCEEEECCCCCEEEEEEECHHHHHCCCCHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MWSRQSRILSRYKQMPVVHFLNVKEGDCSIIEHTSGHISVIDVCNARKETPESKIVESIV
CCCHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHH
KNIMTKAAGSGNLNQKAYPVNPISYMKERSLTSVFRFVATHPDMDHIDGIKDFFEEFNPT
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NFYDIENEKEIEFNDKSPYLEEDWKFYKNLRDTDPDTDPRRLTLFSGDSGIYRTKNWDGN
CEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEECCCCCCC
PPGDAFYVLAPTSEMVREAKELEDYNDCSYVILYRSPGGKILFGGDSHDGTWEHLLKNHE
CCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHCC
NSIKNVDLLIAPHHGRKSDRDYSFLDVVNPKMTFFGNARSEHLAYSAWSSRNLPYITNNQ
CCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCEEEECCCCCCCCEEECCC
ADCMIVNANDEHMPIYVTNETFAKQRNPKSQYSSRFKGWFLQNIK
CCEEEECCCCCEEEEEEECHHHHHCCCCHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA