Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859885

Identifier: 85859885

GI number: 85859885

Start: 2121846

End: 2122610

Strand: Direct

Name: 85859885

Synonym: SYN_00498

Alternate gene names: NA

Gene position: 2121846-2122610 (Clockwise)

Preceding gene: 85859884

Following gene: 85859887

Centisome position: 66.74

GC content: 45.36

Gene sequence:

>765_bases
ATGAAACATAAAAAAGGTTCTATTCTTGTCTATTCCCTCATAATCCTCACCACTATGCTGGCCATAGTCGGTTCAGTGAC
TTCTGTGAGCCTTATGGAGAAGAAAGGAGCAAGTTCCACCCAAGCTTCTGTCCAAGCCTACCAGGTGGCCGATAGCGGGG
TCCAGTTCGCCATAAGGAAGATAAACGCCAGGATTAGTGCCGGAGGAGGAACCATAGAAGAAGCTTTCGGATCGGGAAGC
TGCAATAGCGGTAAGATTCCTACCAATGCTGACGGAGGGCCCATAGGATCGAATTATGAGCTGACTTTTTATGATTCAAG
CGATGCCAAGATTATTGACTGTAATGCTCAGGTAAGCAGCATAAACAGCATAGGATCAGTCGGGACGTATGATGGAGCTG
TCAGGGCCGTGAATGTGGCGGTGGCGGCAGGAGGGGACTATCAGTCTGTCTATGTTGATACAGATGGTGATCTCGTTTTT
TTATGTAAAATCAATACGACCACTGGTGTTGTAGGTTGCAAGGCCAAAGAAGATGTTACAAATAGCGTCCCCTGGTATAC
ATGTAAAAGTCCTTGGTCGTCACCTACATCGGGTAATTATAGTTTGGATTGTGTGTATGTAAACCCTGGTAATGGTTTTA
GCTGTTGTAGAACCAATGCGGATACGGGCACCATTGAATGTAAATATTCCAAGTCTTTTTTTGGGGGTGCATGTAAAATG
TATAGTCCAGATGCAGATTGGATGTCGATAACACCATCGCCTTAG

Upstream 100 bases:

>100_bases
TGGCTTGTTGGCAAAAAAATCTTTCATGGTATAATTAAATAAATAATTAATAATGTCAGCTTGTTGTATTGTCATGGTGC
AATGATTTGACAGCTCGGAT

Downstream 100 bases:

>100_bases
TAATTGACTTACTGTGATTCAAGCAATACTAAGATCACTGACTTCAGTGCTTTTTGGTAAGCACTATAAACAGCATATTA
TCAGTCGAGACGTATGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS
CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF
LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM
YSPDADWMSITPSP

Sequences:

>Translated_254_residues
MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS
CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF
LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM
YSPDADWMSITPSP
>Mature_254_residues
MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS
CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF
LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM
YSPDADWMSITPSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26515; Mature: 26515

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRK
CCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCHHHEEEEEECCCCHHEEEEE
INARISAGGGTIEEAFGSGSCNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSS
EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCC
INSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVFLCKINTTTGVVGCKAKEDVT
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCEEECCCCHHHC
NSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM
CCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEE
YSPDADWMSITPSP
ECCCCCEEEECCCC
>Mature Secondary Structure
MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRK
CCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCHHHEEEEEECCCCHHEEEEE
INARISAGGGTIEEAFGSGSCNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSS
EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCC
INSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVFLCKINTTTGVVGCKAKEDVT
CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCEEECCCCHHHC
NSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM
CCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEE
YSPDADWMSITPSP
ECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA