| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859885
Identifier: 85859885
GI number: 85859885
Start: 2121846
End: 2122610
Strand: Direct
Name: 85859885
Synonym: SYN_00498
Alternate gene names: NA
Gene position: 2121846-2122610 (Clockwise)
Preceding gene: 85859884
Following gene: 85859887
Centisome position: 66.74
GC content: 45.36
Gene sequence:
>765_bases ATGAAACATAAAAAAGGTTCTATTCTTGTCTATTCCCTCATAATCCTCACCACTATGCTGGCCATAGTCGGTTCAGTGAC TTCTGTGAGCCTTATGGAGAAGAAAGGAGCAAGTTCCACCCAAGCTTCTGTCCAAGCCTACCAGGTGGCCGATAGCGGGG TCCAGTTCGCCATAAGGAAGATAAACGCCAGGATTAGTGCCGGAGGAGGAACCATAGAAGAAGCTTTCGGATCGGGAAGC TGCAATAGCGGTAAGATTCCTACCAATGCTGACGGAGGGCCCATAGGATCGAATTATGAGCTGACTTTTTATGATTCAAG CGATGCCAAGATTATTGACTGTAATGCTCAGGTAAGCAGCATAAACAGCATAGGATCAGTCGGGACGTATGATGGAGCTG TCAGGGCCGTGAATGTGGCGGTGGCGGCAGGAGGGGACTATCAGTCTGTCTATGTTGATACAGATGGTGATCTCGTTTTT TTATGTAAAATCAATACGACCACTGGTGTTGTAGGTTGCAAGGCCAAAGAAGATGTTACAAATAGCGTCCCCTGGTATAC ATGTAAAAGTCCTTGGTCGTCACCTACATCGGGTAATTATAGTTTGGATTGTGTGTATGTAAACCCTGGTAATGGTTTTA GCTGTTGTAGAACCAATGCGGATACGGGCACCATTGAATGTAAATATTCCAAGTCTTTTTTTGGGGGTGCATGTAAAATG TATAGTCCAGATGCAGATTGGATGTCGATAACACCATCGCCTTAG
Upstream 100 bases:
>100_bases TGGCTTGTTGGCAAAAAAATCTTTCATGGTATAATTAAATAAATAATTAATAATGTCAGCTTGTTGTATTGTCATGGTGC AATGATTTGACAGCTCGGAT
Downstream 100 bases:
>100_bases TAATTGACTTACTGTGATTCAAGCAATACTAAGATCACTGACTTCAGTGCTTTTTGGTAAGCACTATAAACAGCATATTA TCAGTCGAGACGTATGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM YSPDADWMSITPSP
Sequences:
>Translated_254_residues MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM YSPDADWMSITPSP >Mature_254_residues MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRKINARISAGGGTIEEAFGSGS CNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSSINSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVF LCKINTTTGVVGCKAKEDVTNSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM YSPDADWMSITPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26515; Mature: 26515
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRK CCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCHHHEEEEEECCCCHHEEEEE INARISAGGGTIEEAFGSGSCNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSS EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCC INSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVFLCKINTTTGVVGCKAKEDVT CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCEEECCCCHHHC NSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM CCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEE YSPDADWMSITPSP ECCCCCEEEECCCC >Mature Secondary Structure MKHKKGSILVYSLIILTTMLAIVGSVTSVSLMEKKGASSTQASVQAYQVADSGVQFAIRK CCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCHHHEEEEEECCCCHHEEEEE INARISAGGGTIEEAFGSGSCNSGKIPTNADGGPIGSNYELTFYDSSDAKIIDCNAQVSS EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCC INSIGSVGTYDGAVRAVNVAVAAGGDYQSVYVDTDGDLVFLCKINTTTGVVGCKAKEDVT CCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCEEECCCCHHHC NSVPWYTCKSPWSSPTSGNYSLDCVYVNPGNGFSCCRTNADTGTIECKYSKSFFGGACKM CCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCEEEE YSPDADWMSITPSP ECCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA