| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859888
Identifier: 85859888
GI number: 85859888
Start: 2124900
End: 2125718
Strand: Direct
Name: 85859888
Synonym: SYN_00501
Alternate gene names: NA
Gene position: 2124900-2125718 (Clockwise)
Preceding gene: 85859887
Following gene: 85859889
Centisome position: 66.84
GC content: 38.71
Gene sequence:
>819_bases TTGCTTATGAAAATTCATATCTTTGATGTTGAGCATGGCGAATGTAATGCCATAGAAACTCCCTCTGGGCACCTGTTTTT GATTGGTACAGGCCATAATTCTTCGACAAACTGGCGTCCTTCAACATGGGTAAGTTGGCGTAACCAACGGCCACACTGCA TAGTTTTAACCAACCTTGATAAGGATCATCTCTCTGATCTTTCCAATTTCGAACCACATCTGCGCCCTGATACTATAAAA CGCAATGATTATGTAAATCCTCAATGGATAGAGGATATGAAGTATGAGGAAAGTGGCGAAGTGCATTCGGGCGTCCAAAC TGCACTGGACTGGATGAGTAATGTATTTAATGGGGAGGTAATTACTCCAGATTATGGAATGGAAAAATTATTTTTCTATC ATTCACCGATATTGTTTCAAGATACGAATAATTTAAGTGTTGTTACATTTGTCCGCTATAATAATATTGGAATTATGTTT CCGGGTGATATTGAAACTGCGGGCTGGAAAGAATTTCTAAAAGATCCATCATTTGTTAATTGTCTTCTTCGGACAAATAT TTTGATTGCTTCTCATCACGGACGTGAAACTGGCTATTGCAGTGAGATTTTCAATTACTGTAGGCCAGACGCAGTTATTA TCTCGGACAAGTCCATTGTACACGGAACCCAATCCCATGATCTTTATAGCCAGCATTGTAGTGGTCTTGATTTTGGTGGA AAAATTAGAAAAGTCCTTACAACTCGGAATGATGGTAAAATTACAATCGATCTGCCGGCCATTGGACCGTACACGGTTTA TATAAATCAATCTTATTAA
Upstream 100 bases:
>100_bases GCCAATTTATGTCACTAATGAAACCTTCGCTAAACAGAGAAATCCCAAAAGTCAATATTCAAGTAGATTTAAAGGATGGT TTTTGCAAAATATAAAATAA
Downstream 100 bases:
>100_bases AGAAATAGACTATGATCGAAAATCTCAAAGATTTTTTTGATGAGTACAGCCTGAAGGCTAGAGTTTATCCAAGTTTAATC GCATTGGCCCCTTTATTTTT
Product: metallo-beta-lactamase superfamily hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLMKIHIFDVEHGECNAIETPSGHLFLIGTGHNSSTNWRPSTWVSWRNQRPHCIVLTNLDKDHLSDLSNFEPHLRPDTIK RNDYVNPQWIEDMKYEESGEVHSGVQTALDWMSNVFNGEVITPDYGMEKLFFYHSPILFQDTNNLSVVTFVRYNNIGIMF PGDIETAGWKEFLKDPSFVNCLLRTNILIASHHGRETGYCSEIFNYCRPDAVIISDKSIVHGTQSHDLYSQHCSGLDFGG KIRKVLTTRNDGKITIDLPAIGPYTVYINQSY
Sequences:
>Translated_272_residues MLMKIHIFDVEHGECNAIETPSGHLFLIGTGHNSSTNWRPSTWVSWRNQRPHCIVLTNLDKDHLSDLSNFEPHLRPDTIK RNDYVNPQWIEDMKYEESGEVHSGVQTALDWMSNVFNGEVITPDYGMEKLFFYHSPILFQDTNNLSVVTFVRYNNIGIMF PGDIETAGWKEFLKDPSFVNCLLRTNILIASHHGRETGYCSEIFNYCRPDAVIISDKSIVHGTQSHDLYSQHCSGLDFGG KIRKVLTTRNDGKITIDLPAIGPYTVYINQSY >Mature_272_residues MLMKIHIFDVEHGECNAIETPSGHLFLIGTGHNSSTNWRPSTWVSWRNQRPHCIVLTNLDKDHLSDLSNFEPHLRPDTIK RNDYVNPQWIEDMKYEESGEVHSGVQTALDWMSNVFNGEVITPDYGMEKLFFYHSPILFQDTNNLSVVTFVRYNNIGIMF PGDIETAGWKEFLKDPSFVNCLLRTNILIASHHGRETGYCSEIFNYCRPDAVIISDKSIVHGTQSHDLYSQHCSGLDFGG KIRKVLTTRNDGKITIDLPAIGPYTVYINQSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31115; Mature: 31115
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMKIHIFDVEHGECNAIETPSGHLFLIGTGHNSSTNWRPSTWVSWRNQRPHCIVLTNLD CEEEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCC KDHLSDLSNFEPHLRPDTIKRNDYVNPQWIEDMKYEESGEVHSGVQTALDWMSNVFNGEV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCE ITPDYGMEKLFFYHSPILFQDTNNLSVVTFVRYNNIGIMFPGDIETAGWKEFLKDPSFVN ECCCCCCCEEEEEECCEEEEECCCEEEEEEEEECCEEEEECCCCCCCCHHHHHCCCHHHH CLLRTNILIASHHGRETGYCSEIFNYCRPDAVIISDKSIVHGTQSHDLYSQHCSGLDFGG HHHHCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHCCCCCCCC KIRKVLTTRNDGKITIDLPAIGPYTVYINQSY CEEEEEEECCCCEEEEEECCCCCEEEEEECCC >Mature Secondary Structure MLMKIHIFDVEHGECNAIETPSGHLFLIGTGHNSSTNWRPSTWVSWRNQRPHCIVLTNLD CEEEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCC KDHLSDLSNFEPHLRPDTIKRNDYVNPQWIEDMKYEESGEVHSGVQTALDWMSNVFNGEV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCE ITPDYGMEKLFFYHSPILFQDTNNLSVVTFVRYNNIGIMFPGDIETAGWKEFLKDPSFVN ECCCCCCCEEEEEECCEEEEECCCEEEEEEEEECCEEEEECCCCCCCCHHHHHCCCHHHH CLLRTNILIASHHGRETGYCSEIFNYCRPDAVIISDKSIVHGTQSHDLYSQHCSGLDFGG HHHHCCEEEEECCCCCCCCHHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHCCCCCCCC KIRKVLTTRNDGKITIDLPAIGPYTVYINQSY CEEEEEEECCCCEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA