| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is aceF [C]
Identifier: 85859864
GI number: 85859864
Start: 2097218
End: 2097427
Strand: Direct
Name: aceF [C]
Synonym: SYN_00479
Alternate gene names: 85859864
Gene position: 2097218-2097427 (Clockwise)
Preceding gene: 85859862
Following gene: 85859865
Centisome position: 65.96
GC content: 50.48
Gene sequence:
>210_bases ATGGAAGTCACTGTACCCATGGAAGGAAAGGTTGTAGCAATCAAAGTTAATGTCGGCGACAAGGTTGAAGAAGACGACGA AATCGCGGTCATGGAAGCCATGAAGATGGAAATGCCTGTCCCGTCGCCGGTCAGCGGCGTCGTAAAACAAATCATGGTCA AGGTTGGTGACAAGGTTGCGGCTGAGGCTGCGTTGATGGTCATCGAATAG
Upstream 100 bases:
>100_bases TGATGGCAGTCAACCAGCTTTATAGATAGTGGGTTTCCGTTGCCGAAAGGGATGGGCCCTGGCAGTTAAAATTCATCAAA AGAAACTGTAGGAGGAAATT
Downstream 100 bases:
>100_bases ATCAGATTTTCCAGATATTACACACCAAAGAAACAAGAAAACACCCCATACCGATCTTTACAAAGTGGTTCAGCCGCTTC AAAATGCAGGATATTCAATG
Product: biotin carboxyl carrier protein of glutaconyl-CoA decarboxylase
Products: pyruvate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MEVTVPMEGKVVAIKVNVGDKVEEDDEIAVMEAMKMEMPVPSPVSGVVKQIMVKVGDKVAAEAALMVIE
Sequences:
>Translated_69_residues MEVTVPMEGKVVAIKVNVGDKVEEDDEIAVMEAMKMEMPVPSPVSGVVKQIMVKVGDKVAAEAALMVIE >Mature_69_residues MEVTVPMEGKVVAIKVNVGDKVEEDDEIAVMEAMKMEMPVPSPVSGVVKQIMVKVGDKVAAEAALMVIE
Specific function: The Pyruvate Dehydrogenase Complex Catalyzes The Overall Conversion Of Pyruvate To Acetyl-CoA And Co(2). It Contains Multiple Copies Of Three Enzymatic Components: Pyruvate Dehydrogenase (E1), Dihydrolipoamide Acetyltransferase (E2) And Lipoamide Dehydrog
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24652212, Length=68, Percent_Identity=50, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652210, Length=68, Percent_Identity=50, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652214, Length=68, Percent_Identity=50, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI19921944, Length=68, Percent_Identity=50, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652216, Length=68, Percent_Identity=50, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI281363050, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652224, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652222, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652220, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652218, Length=68, Percent_Identity=50, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 1120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 912 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.3
Molecular weight: Translated: 7371; Mature: 7371
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 11.6 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.6 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTVPMEGKVVAIKVNVGDKVEEDDEIAVMEAMKMEMPVPSPVSGVVKQIMVKVGDKVA CEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC AEAALMVIE CCEEEEEEC >Mature Secondary Structure MEVTVPMEGKVVAIKVNVGDKVEEDDEIAVMEAMKMEMPVPSPVSGVVKQIMVKVGDKVA CEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC AEAALMVIE CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: oxaloacetate
Specific reaction: oxaloacetate = pyruvate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA