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The map label for this gene is yhhG [C]

Identifier: 85859862

GI number: 85859862

Start: 2095286

End: 2095699

Strand: Direct

Name: yhhG [C]

Synonym: SYN_00477

Alternate gene names: 85859862

Gene position: 2095286-2095699 (Clockwise)

Preceding gene: 85859857

Following gene: 85859864

Centisome position: 65.9

GC content: 47.58

Gene sequence:

>414_bases
ATGTCTGATATCGTCAGGTTTGGTGTATCACTGGACAACACGTTACTGAAACAGTTTGATCGGTTCATCAAGGATCGGAA
CTACACAAACCGATCCGAAGCCATACGCGACCTGATCCGCCAGGAGCTATTGAAGAAGGAATGGACGGAAGATCAGGAAG
TCGCCGGGGCCATTACCTATATCTATGACCATCATCAGCGGGACTTGCTTAATAAAATAATTGATATCCAGCACGATTTT
CATGATGTCATCAAGTCAACACAGCACATCCATCTCGACCATGACAACTGCCTGGAAATCGTCGCGGTCAAGGGAAATCC
GACCACCATCAGCAAGCTTTCCAACGCATTGAAGGCCATCAAAGGCGTAAGACACGGATCACTAAGCATTTCGGGCGTTG
GTCAGATCGCATGA

Upstream 100 bases:

>100_bases
TTTCTTCGACTGACCAACCGCAATACTGCGAATTTTTGAAATTGACGAATCCGCCCGCGAAGTGCTATTAAATCAACCTA
TTCCAGCTTAGAGGAAGATC

Downstream 100 bases:

>100_bases
AAAATATCTTTTTCTGTTCTGAAAAGACCGTCCATAAAATTCACAGGTCGACAAGTCGGCACGCATAAAAGAAAAGGGGT
TACAGTAAATCCTGCAACCC

Product: nickel-responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTEDQEVAGAITYIYDHHQRDLLNKIIDIQHDF
HDVIKSTQHIHLDHDNCLEIVAVKGNPTTISKLSNALKAIKGVRHGSLSISGVGQIA

Sequences:

>Translated_137_residues
MSDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTEDQEVAGAITYIYDHHQRDLLNKIIDIQHDF
HDVIKSTQHIHLDHDNCLEIVAVKGNPTTISKLSNALKAIKGVRHGSLSISGVGQIA
>Mature_136_residues
SDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTEDQEVAGAITYIYDHHQRDLLNKIIDIQHDFH
DVIKSTQHIHLDHDNCLEIVAVKGNPTTISKLSNALKAIKGVRHGSLSISGVGQIA

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=105, Percent_Identity=41.9047619047619, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_SYNAS (Q2LUY2)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_462064.1
- ProteinModelPortal:   Q2LUY2
- SMR:   Q2LUY2
- STRING:   Q2LUY2
- GeneID:   3884604
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00477
- NMPDR:   fig|56780.10.peg.2012
- eggNOG:   COG0864
- HOGENOM:   HBG646378
- OMA:   CLEVLVV
- PhylomeDB:   Q2LUY2
- ProtClustDB:   CLSK571221
- BioCyc:   SACI56780:SYN_00477-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15672; Mature: 15541

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTEDQEVAGAITY
CCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IYDHHQRDLLNKIIDIQHDFHDVIKSTQHIHLDHDNCLEIVAVKGNPTTISKLSNALKAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHH
KGVRHGSLSISGVGQIA
HHCCCCCEEECCCCCCC
>Mature Secondary Structure 
SDIVRFGVSLDNTLLKQFDRFIKDRNYTNRSEAIRDLIRQELLKKEWTEDQEVAGAITY
CCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IYDHHQRDLLNKIIDIQHDFHDVIKSTQHIHLDHDNCLEIVAVKGNPTTISKLSNALKAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHH
KGVRHGSLSISGVGQIA
HHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA