Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859857

Identifier: 85859857

GI number: 85859857

Start: 2090849

End: 2091877

Strand: Direct

Name: 85859857

Synonym: SYN_00472

Alternate gene names: NA

Gene position: 2090849-2091877 (Clockwise)

Preceding gene: 85859856

Following gene: 85859862

Centisome position: 65.76

GC content: 52.67

Gene sequence:

>1029_bases
ATGATCTCATCTTTAAAAAAATGCATCATCGTGTCACTCATGCTTGCCGGCATCCTGACTTTTCTTCTGCCGGCCAGGGC
GTTGTGCGCCGGTAGTGTTCCCTTAAATAAAGGGGCGATCGCAATCATGACCCGGTTTGACGAATCCGGCAAGGGGTCAC
CCGAACCTTCTTTCCTTAATCTTCAATACGGTGGATCCGCCGACACCAATGCGGCCCGGAAAACCCTGCGGGCCATGGCC
AAGGCGTCACCGGACTCCAAAGCATCTTACTGGGCTAAACTGGGAACACGATTCTCCGTCCAGAAGGGAAGCGGAGGAGA
AACCTACGGAAGGGCAAGAATTACCCTCTACGGGCTCTCTTATTCCGGAACTGTAAACACTCCGAAAGCCTCGGCAGGGA
AAGTCACTCTGAAGATGACGATTTCCAGCATCCAGAGCAAAGCCATGGCGGAATTAACCCTTTTAAACGCCTCAGGAAAC
GGCACATCGCCGAAGATTTATGAAAAAGAAAAGGCAGACGGTTCCGCAGATATTCATGTCACAGCAGGAGATACGATCCT
GGTCGAGCTGGAACTCGTTGCTTCGGCAGGCAGTGGATTTCAGAAGTCTCCCGCCGAAGTCGACTTCTACTCGGGAAAGA
AAAAAGTCTCCTTTGAGGGCATCCGGGTCGAGATACTTGACACGGACCCCCCTCTTCCCATTGCCACTCCCCTTCCCGGA
CAGGTTCTTTTTTACGACAATCCCCGGTGTCTGAACGTCAAACCCGAGAGCTGCCTTATCCTTAACAAGGGCGAGCAGGT
TGATGACCTGACCCAGCGCAGCCGGTCGCAGGACTCTGCGGAAACCTGGAATGATCGGATTGCCTGCCTGAAAATAGGGT
CGGATGTCAACCGGGTGACTGTCTATCAGAATGCGAATTTCAAAGGAAGGAGCCGCTCTTTCACCCGGACGGTCTCAAAT
CCTCACGGAGTTTGGAGCCTTCATGGAAACGGATGGGACAGGGATATCAGTTCCATCGTGATCGAATAA

Upstream 100 bases:

>100_bases
CTGTCCGGATATCATTACCGCTATAGATATAAGCGGATATATCCTTGAAATACCTGTGCTTTAATAATCGGGGATAAATC
CGCGATGAAATTTTATCATC

Downstream 100 bases:

>100_bases
ACCCCTCGATTTCCCTCATTCGGCGGGCAGGATCTTGACCAGCACCTTTCTCGTCCGCGGGCCGTCAAACTCACAGAAGA
AGACCGATTGCCACGTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA
KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN
GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG
QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN
PHGVWSLHGNGWDRDISSIVIE

Sequences:

>Translated_342_residues
MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA
KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN
GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG
QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN
PHGVWSLHGNGWDRDISSIVIE
>Mature_342_residues
MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA
KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN
GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG
QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN
PHGVWSLHGNGWDRDISSIVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36705; Mature: 36705

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
LQYGGSADTNAARKTLRAMAKASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLS
EEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEE
YSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGNGTSPKIYEKEKADGSADIHV
ECCCCCCCCCCCCEEEEEEEEHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCEEEE
TAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG
ECCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCC
QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVT
EEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCEEE
VYQNANFKGRSRSFTRTVSNPHGVWSLHGNGWDRDISSIVIE
EEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHEECC
>Mature Secondary Structure
MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE
LQYGGSADTNAARKTLRAMAKASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLS
EEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEE
YSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGNGTSPKIYEKEKADGSADIHV
ECCCCCCCCCCCCEEEEEEEEHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCEEEE
TAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG
ECCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCC
QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVT
EEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCEEE
VYQNANFKGRSRSFTRTVSNPHGVWSLHGNGWDRDISSIVIE
EEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA