| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859857
Identifier: 85859857
GI number: 85859857
Start: 2090849
End: 2091877
Strand: Direct
Name: 85859857
Synonym: SYN_00472
Alternate gene names: NA
Gene position: 2090849-2091877 (Clockwise)
Preceding gene: 85859856
Following gene: 85859862
Centisome position: 65.76
GC content: 52.67
Gene sequence:
>1029_bases ATGATCTCATCTTTAAAAAAATGCATCATCGTGTCACTCATGCTTGCCGGCATCCTGACTTTTCTTCTGCCGGCCAGGGC GTTGTGCGCCGGTAGTGTTCCCTTAAATAAAGGGGCGATCGCAATCATGACCCGGTTTGACGAATCCGGCAAGGGGTCAC CCGAACCTTCTTTCCTTAATCTTCAATACGGTGGATCCGCCGACACCAATGCGGCCCGGAAAACCCTGCGGGCCATGGCC AAGGCGTCACCGGACTCCAAAGCATCTTACTGGGCTAAACTGGGAACACGATTCTCCGTCCAGAAGGGAAGCGGAGGAGA AACCTACGGAAGGGCAAGAATTACCCTCTACGGGCTCTCTTATTCCGGAACTGTAAACACTCCGAAAGCCTCGGCAGGGA AAGTCACTCTGAAGATGACGATTTCCAGCATCCAGAGCAAAGCCATGGCGGAATTAACCCTTTTAAACGCCTCAGGAAAC GGCACATCGCCGAAGATTTATGAAAAAGAAAAGGCAGACGGTTCCGCAGATATTCATGTCACAGCAGGAGATACGATCCT GGTCGAGCTGGAACTCGTTGCTTCGGCAGGCAGTGGATTTCAGAAGTCTCCCGCCGAAGTCGACTTCTACTCGGGAAAGA AAAAAGTCTCCTTTGAGGGCATCCGGGTCGAGATACTTGACACGGACCCCCCTCTTCCCATTGCCACTCCCCTTCCCGGA CAGGTTCTTTTTTACGACAATCCCCGGTGTCTGAACGTCAAACCCGAGAGCTGCCTTATCCTTAACAAGGGCGAGCAGGT TGATGACCTGACCCAGCGCAGCCGGTCGCAGGACTCTGCGGAAACCTGGAATGATCGGATTGCCTGCCTGAAAATAGGGT CGGATGTCAACCGGGTGACTGTCTATCAGAATGCGAATTTCAAAGGAAGGAGCCGCTCTTTCACCCGGACGGTCTCAAAT CCTCACGGAGTTTGGAGCCTTCATGGAAACGGATGGGACAGGGATATCAGTTCCATCGTGATCGAATAA
Upstream 100 bases:
>100_bases CTGTCCGGATATCATTACCGCTATAGATATAAGCGGATATATCCTTGAAATACCTGTGCTTTAATAATCGGGGATAAATC CGCGATGAAATTTTATCATC
Downstream 100 bases:
>100_bases ACCCCTCGATTTCCCTCATTCGGCGGGCAGGATCTTGACCAGCACCTTTCTCGTCCGCGGGCCGTCAAACTCACAGAAGA AGACCGATTGCCACGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN PHGVWSLHGNGWDRDISSIVIE
Sequences:
>Translated_342_residues MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN PHGVWSLHGNGWDRDISSIVIE >Mature_342_residues MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLNLQYGGSADTNAARKTLRAMA KASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLSYSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGN GTSPKIYEKEKADGSADIHVTAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVTVYQNANFKGRSRSFTRTVSN PHGVWSLHGNGWDRDISSIVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36705; Mature: 36705
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE LQYGGSADTNAARKTLRAMAKASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLS EEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEE YSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGNGTSPKIYEKEKADGSADIHV ECCCCCCCCCCCCEEEEEEEEHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCEEEE TAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG ECCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCC QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVT EEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCEEE VYQNANFKGRSRSFTRTVSNPHGVWSLHGNGWDRDISSIVIE EEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHEECC >Mature Secondary Structure MISSLKKCIIVSLMLAGILTFLLPARALCAGSVPLNKGAIAIMTRFDESGKGSPEPSFLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEE LQYGGSADTNAARKTLRAMAKASPDSKASYWAKLGTRFSVQKGSGGETYGRARITLYGLS EEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEEEE YSGTVNTPKASAGKVTLKMTISSIQSKAMAELTLLNASGNGTSPKIYEKEKADGSADIHV ECCCCCCCCCCCCEEEEEEEEHHHHHHHEEEEEEEECCCCCCCCCEEECCCCCCCCEEEE TAGDTILVELELVASAGSGFQKSPAEVDFYSGKKKVSFEGIRVEILDTDPPLPIATPLPG ECCCEEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCC QVLFYDNPRCLNVKPESCLILNKGEQVDDLTQRSRSQDSAETWNDRIACLKIGSDVNRVT EEEEECCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCEEE VYQNANFKGRSRSFTRTVSNPHGVWSLHGNGWDRDISSIVIE EEECCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA